Job Description P0ACN7 Confidence 88.44% Date Thu Jan 5 11:18:37 GMT 2012 Rank 336 Aligned Residues 202 % Identity 9% Template c3p3wC_ PDB info PDB header:transport protein Chain: C: PDB Molecule:glutamate receptor 3; PDBTitle: structure of a dimeric glua3 n-terminal domain (ntd) at 4.2 a2 resolution Resolution 4.20 Å

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		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.				.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																																			.	.	.									.
Query SS confidence																																			.	.	.									.
Query Sequence		E	S	R	T	I	L	V	I	V	P	D	I	C	D	P	F	F	S	E	I	I	R	G	I	E	V	T	A	A	N	H	G	Y	.	.	.	L	V	L	I	G	D	C	A	.	H	Q	N	Q	Q	E	K	T	F	I	D	L	I	I	T	K	Q	I	D	G	M	L	L	L	G	S	R	L	P	F	D	A	S	I	E
Query Conservation																																			.	.	.									.
Alig confidence																																			.	.	.									.
Template Conservation
Template Sequence		N	T	I	S	I	G	G	L	F	M	R	N	T	V	Q	E	H	S	A	F	R	F	A	V	Q	L	Y	N	T	N	Q	N	P	F	H	L	N	Y	H	V	D	H	L	D	S	S	N	S	F	S	V	T	N	A	F	C	S	Q	F	S	R	G	V	Y	A	I	F	G	F	Y	D	Q	M	S	M	N	T	L	T	S
Template Known Secondary structure												S	S																	S																S	S															T	T		S								T	T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	R	N	L	P	P	M	V	M	A	N	E	F	A	P	E	L	E	L	P	T	V	H	I	D	N	L	T	A	A	F	D	A	V	N	Y	L	Y	E	Q	G	H	K	R	I	G	C	I	A	G	P	E	E	M	P	L	C	H	Y	R	L	Q	G	Y	V	Q	A	L	R	R	C	G	I	M	V	D	P	Q	Y
Query Conservation
Alig confidence																																																												.	.	.
Template Conservation																																																												.	.	.
Template Sequence		F	C	G	A	L	H	T	S	F	V	T	P	S	F	P	T	D	A	D	V	Q	F	V	I	Q	M	R	P	A	L	K	G	A	I	L	S	L	L	S	Y	Y	K	W	E	K	F	V	Y	L	Y	D	T	E	R	G	F	S	V	.	.	.	L	Q	A	I	M	E	A	A	V	Q	N	N	W	Q	V	T	A	R	S
Template Known Secondary structure						T	T						S	S				S	S			S	S					S														T	T										S	S	S		S			.	.	.									T	T	T	T
Template Predicted Secondary structure																																																												.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.				.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	R	G	D	F	T	F	E	A	G	S	K	A	M	Q	Q	L	L	D	L	P	Q	P	P	T	A	V	F	C	H	S	D	V	M	A	L	G	A	L	S	Q	A	K	R	Q	G	L	K	V	P
Query Conservation
Alig confidence											.	.
Template Conservation											.	.
Template Sequence		V	G	N	I	K	D	V	Q	E	.	.	F	R	R	I	I	E	E	M	D	R	R	Q	E	K	R	Y	L	I	D	C	E	V	E	R	I	N	T	I	L	E	Q	V	K	H	S	R	G	Y	H	Y
Template Known Secondary structure			S	S			S	T	T		.	.									T	T	T	T																			T					T	T
Template Predicted Secondary structure											.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.			.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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