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Job DescriptionP0ACN7
Confidence96.30%DateThu Jan 5 11:18:37 GMT 2012
Rank98Aligned Residues205
% Identity12%Templatec3lkbB_
PDB info PDB header:transport proteinChain: B: PDB Molecule:probable branched-chain amino acid abc PDBTitle: crystal structure of a branched chain amino acid abc2 transporter from thermus thermophilus with bound valine
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   64.....70......... 80.........90..... ....100.........110.........120.. .......130.
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Query Sequence  RNESRTILVIVPDICD. . PFFSEIIRGIEVTAAN. . . . . . . . . HGYLVLIGDCAHQNQQEKTFIDLIITK. QIDGMLLLG
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Template Sequence  GQQQVTLFWSGAITGPTSDAGAPYGAAVEDYCKWANERKLVPGVVFNCVVRDDQYNNANTQRFFEEAVDRFKIPVFLSYA
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   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   132.......140.........150... ......160.........170.........180.........190.........200.....
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Query Sequence  SRLPFDASIEEQRNLPPMVMAN. . . . . . EFAPELELPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQG
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Template Sequence  TGANLQLKPLIQELRIPTIPASMHIELIDPPNNDYIFLPTTSYSEQVVALLEYIAREKKGAKVALV. VHPSPFGRAPVED
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   84.....90.........100.........110.........120.........130.........140......... 150.........160..
 
   206...210.........220.........230.........240.........250.........260.........270..
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Query Sequence  YVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLLDLPQPPTAVFCHSDVMALGALSQAKRQGLKVP
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Template Sequence  ARKAARELGLQIV. . DVQEVGSGNLDNTALLKRFEQAGVEY. VVHQNVAGPVANILKDAKRLGLKMR
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   163......170..... ....180.........190.........200. ........210.........220......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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