Job Description P0ACN7 Confidence 100.00% Date Thu Jan 5 11:18:37 GMT 2012 Rank 45 Aligned Residues 264 % Identity 16% Template c3l6uA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:abc-type sugar transport system periplasmic PDBTitle: crystal structure of abc-type sugar transport system,2 periplasmic component from exiguobacterium sibiricum Resolution 1.90 Å

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		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																																																						.	.
Query SS confidence																																																																						.	.
Query Sequence		R	T	I	L	V	I	V	P	D	I	C	D	P	F	F	S	E	I	I	R	G	I	E	V	T	A	A	N	H	G	Y	L	V	L	I	G	D	C	A	H	Q	N	Q	Q	E	K	T	F	I	D	L	I	I	T	K	Q	I	D	G	M	L	L	L	G	S	R	L	P	.	.	F	D	A	S	I	E	E	Q	R	N
Query Conservation																																																																						.	.
Alig confidence																																																																						.	.
Template Conservation
Template Sequence		N	I	V	G	F	T	I	V	N	D	K	H	E	F	A	Q	R	L	I	N	A	F	K	A	E	A	K	A	N	K	Y	E	A	L	V	A	T	S	Q	N	S	R	I	S	E	R	E	Q	I	L	E	F	V	H	L	K	V	D	A	I	F	I	T	T	L	D	D	V	Y	I	G	S	A	I	E	E	A	K	K	A
Template Known Secondary structure									S		S		S																	T	T									S	S															T	T		S							S		T	T	T	T										T
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.								.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure											.																													.	.	.	.	.	.	.
Query SS confidence											.																													.	.	.	.	.	.	.
Query Sequence		L	P	P	M	V	M	A	N	E	.	F	A	P	E	L	E	L	P	T	V	H	I	D	N	L	T	A	A	F	D	A	V	N	Y	L	Y	E	Q	.	.	.	.	.	.	.	G	H	K	R	I	G	C	I	A	G	P	E	E	M	P	L	C	H	Y	R	L	Q	G	Y	V	Q	A	L	R	R	C	G	I	M	V
Query Conservation											.																													.	.	.	.	.	.	.
Alig confidence											.																													.	.	.	.	.	.	.																																	.
Template Conservation																																																																															.
Template Sequence		G	I	P	V	F	A	I	D	R	X	I	R	S	D	A	V	V	S	S	I	T	S	N	N	Q	X	I	G	E	Q	L	A	S	Y	I	K	N	E	L	I	K	Q	T	G	R	S	T	G	R	I	V	E	I	T	G	T	A	N	V	Y	T	T	N	E	R	H	R	G	F	L	K	G	I	E	N	E	P	.	T	L
Template Known Secondary structure		T							S	S					T	T		S																											S		S										S	T	T																T	T		T	.	T
Template Predicted Secondary structure																																																																															.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	Q	Y	I	A	R	G	D	F	T	F	E	A	G	S	K	A	M	Q	Q	L	L	D	L	P	Q	P	P	T	A	V	F	C	H	S	D	V	M	A	L	G	A	L	S	Q	A	K	R	Q	G	L	K	V	P	E	D	L	S	I	I	G	F	D	N	I	D	L	T	Q	F	C	D	P	P	L	T	T	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	I	V	D	S	V	S	G	N	Y	D	P	V	T	S	E	R	V	X	R	Q	V	I	D	S	G	I	P	F	D	A	V	Y	C	H	N	D	D	I	A	X	G	V	L	E	A	L	K	K	A	K	I	S	G	K	I	V	V	G	I	D	G	N	R	A	I	L	E	A	V	D	X	K	S	X	D	A	T	V	V
Template Known Secondary structure										T	T															T	T				S					S	S														T	T																					T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	R	Y	E	I	G	R	E	A	M	L	L	L	L	D	Q	M	Q	G	Q	H	V	G	S	G	S	R	L	M	D	C	E	L	I	I
Query Conservation
Alig confidence																											.
Template Conservation																											.
Template Sequence		Q	S	A	E	E	X	X	K	V	A	F	S	A	L	K	L	H	T	K	N	K	K	I	P	D	.	R	F	Y	T	Y	S	Y	L	Y	D
Template Known Secondary structure																				T	T					S	.
Template Predicted Secondary structure																											.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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