Job Description P0ACN7 Confidence 100.00% Date Thu Jan 5 11:18:37 GMT 2012 Rank 40 Aligned Residues 262 % Identity 23% Template c3hs3A_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:ribose operon repressor; PDBTitle: crystal structure of periplasmic binding ribose operon2 repressor protein from lactobacillus acidophilus Resolution 1.60 Å

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		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		N	E	S	R	T	I	L	V	I	V	P	D	I	C	D	P	F	F	S	E	I	I	R	G	I	E	V	T	A	A	N	H	G	Y	L	V	L	I	G	.	D	C	A	H	Q	N	Q	Q	E	K	T	F	I	D	L	I	I	T	K	Q	I	D	G	M	L	L	L	G	S	R	L	P	F	D	A	S	I	E	E	Q
Query Conservation																																									.
Alig confidence																																									.																																			.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.
Template Sequence		K	K	S	K	M	I	G	I	I	I	P	D	L	N	N	R	F	Y	A	Q	I	I	D	G	I	Q	E	V	I	Q	K	E	G	Y	T	A	L	I	S	F	S	T	N	S	D	V	K	K	Y	Q	N	A	I	I	N	F	E	N	N	N	V	D	G	I	I	T	S	A	F	T	I	P	P	N	.	.	.	.	.	F
Template Known Secondary structure												S		T	T	S																	T	T									S	S																T	T		S											T	T	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130						.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	N	L	P	P	M	V	M	A	N	E	F	A	P	E	L	E	L	P	T	V	H	I	D	N	L	T	A	A	F	D	A	V	N	Y	L	Y	E	Q	G	H	K	R	I	G	C	I	A	G	P	E	E	M	P	L	C	H	Y	R	L	Q	G	Y	V	Q	A	L	R	R	C	G	I	M	V	D	P	Q	Y	I	A
Query Conservation
Alig confidence																																					.																																						.	.	.	.	.
Template Conservation																																					.																																						.	.	.	.	.
Template Sequence		H	L	N	T	P	L	V	M	Y	D	S	A	N	I	N	D	D	I	V	R	I	V	S	N	N	T	K	G	G	K	E	S	I	K	L	.	L	S	K	K	I	E	K	V	L	I	Q	H	W	P	L	S	L	P	T	I	R	E	R	I	E	A	M	T	A	E	A	S	K	L	K	I	D	.	.	.	.	.	Y	L
Template Known Secondary structure				S	S						S						S	S	S																	T	.	S		T	T									S		T	T	S																	T	T			.	.	.	.	.
Template Predicted Secondary structure																																					.																																						.	.	.	.	.
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.						.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	D	F	T	F	E	A	G	S	K	A	M	Q	Q	L	L	D	L	P	Q	P	P	T	A	V	F	C	H	S	D	V	M	A	L	G	A	L	S	Q	A	K	R	Q	G	L	K	V	P	E	D	L	S	I	I	G	F	D	N	I	D	L	T	Q	F	C	D	P	P	L	T	T	I	A	Q	P	R	Y	E	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	E	T	P	E	N	N	P	Y	I	S	A	Q	S	A	L	N	K	S	N	Q	F	D	A	I	I	T	V	N	D	L	Y	A	A	E	I	I	K	E	A	K	R	R	N	L	K	I	P	D	D	F	Q	L	V	G	Y	D	N	N	I	L	C	G	Y	T	S	P	T	I	S	T	I	D	Q	N	P	K	L	I
Template Known Secondary structure							S	S												T	G	G	G		S					S	S														T	T			T	T	T	T						S	B			G	G	G	G	T	S	S	S			B
Template Predicted Secondary structure
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	E	A	M	L	L	L	L	D	Q	M	Q	G	Q	H	V	G	S	G	S	R	L	M	D	C	E	L	I	I	R	G	S	T	R
Query Conservation
Alig confidence																					.
Template Conservation																					.
Template Sequence		G	Q	T	A	A	H	R	L	L	D	L	M	S	G	N	N	S	T	R	.	N	S	I	I	D	V	L	P	I	K	R	D	S	T	E
Template Known Secondary structure													T	T	T						.
Template Predicted Secondary structure																					.
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.		.	.	.	.	.	310	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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