Job Description P0ACN7 Confidence 100.00% Date Thu Jan 5 11:18:37 GMT 2012 Rank 18 Aligned Residues 274 % Identity 19% Template c3hcwB_ PDB info PDB header:rna binding protein Chain: B: PDB Molecule:maltose operon transcriptional repressor; PDBTitle: crystal structure of probable maltose operon transcriptional repressor2 malr from staphylococcus areus Resolution 2.20 Å

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		64	.	.	.	.	.	70	.	.	.	.	.	.						.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.
Query SS confidence															.	.	.	.	.
Query Sequence		R	N	E	S	R	T	I	L	V	I	V	P	D	.	.	.	.	.	I	C	D	P	F	F	S	E	I	I	R	G	I	E	V	T	A	A	N	H	G	Y	L	V	L	I	G	D	C	A	H	Q	N	Q	Q	E	K	T	F	I	D	L	I	I	T	K	Q	I	D	G	M	L	L	L	G	S	R	L	P	F	D	A
Query Conservation															.	.	.	.	.
Alig confidence															.	.	.	.	.
Template Conservation
Template Sequence		T	N	Q	T	Y	K	I	G	L	V	L	K	G	S	E	E	P	I	R	L	N	P	F	Y	I	N	V	L	L	G	I	S	E	T	C	N	Q	H	G	Y	G	T	Q	T	T	V	S	N	N	M	N	D	L	M	D	E	V	Y	K	M	I	K	Q	R	M	V	D	A	F	I	L	L	Y	S	K	E	N	D	P	I
Template Known Secondary structure													S			S					T																		T	T										S														T	T			S					S				T	T
Template Predicted Secondary structure
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.			.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		S	I	E	E	Q	R	N	L	P	P	M	V	M	A	N	E	F	A	P	.	.	E	L	E	L	P	T	V	H	I	D	N	L	T	A	A	F	D	A	V	N	Y	L	Y	E	Q	G	H	K	R	I	G	C	I	A	G	P	E	E	M	P	L	C	H	Y	R	L	Q	G	Y	V	Q	A	L	R	R	C	G	I	M
Query Conservation																					.	.
Alig confidence																					.	.
Template Conservation
Template Sequence		K	Q	M	L	I	D	E	S	M	P	F	I	V	I	G	K	P	T	S	D	I	D	H	Q	F	T	H	I	D	N	D	N	I	L	A	S	E	N	L	T	R	H	V	I	E	Q	G	V	D	E	L	I	F	I	T	E	K	G	N	F	E	V	S	K	D	R	I	Q	G	F	E	T	V	A	S	Q	F	N	L	D
Template Known Secondary structure								T	T							S				S	S	G	G	G	S	S																					T			S								S	S																			T	T
Template Predicted Secondary structure
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	P	Q	Y	I	A	R	G	D	F	T	F	E	A	G	S	K	A	M	Q	Q	L	L	D	L	P	Q	P	P	T	A	V	F	C	H	S	D	V	M	A	L	G	A	L	S	Q	A	K	R	Q	G	L	K	V	P	E	D	L	S	I	I	G	F	D	N	I	D	L	T	Q	F	C	D	P	P	L	T	T	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	Q	I	I	E	T	S	N	E	R	E	V	I	L	N	Y	M	Q	N	L	H	T	R	L	K	D	P	N	I	K	Q	A	I	I	S	L	D	A	M	L	H	L	A	I	L	S	V	L	Y	E	L	N	I	E	I	P	K	D	V	M	T	A	T	F	N	D	S	Y	L	T	E	I	A	S	P	P	Q	T	C	I
Template Known Secondary structure									S																			S	S	S							S	S														T	T			T	T	T	T							S		S					T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	P	R	Y	E	I	G	R	E	A	M	L	L	L	L	D	Q	M	Q	G	Q	H	V	G	S	G	S	R	L	M	D	C	E	L	I	I	R	G	S	T	R	A
Query Conservation
Alig confidence																											.	.
Template Conservation																											.	.
Template Sequence		D	I	K	P	R	M	L	G	Q	Q	A	G	S	A	I	L	N	I	L	K	N	D	V	I	E	.	.	L	V	I	I	D	T	E	L	K	I	R	K	S	T	Q	R
Template Known Secondary structure																											.	.												G	G	G
Template Predicted Secondary structure																											.	.
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320			.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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