Job Description P0ACN7 Confidence 99.97% Date Thu Jan 5 11:18:37 GMT 2012 Rank 51 Aligned Residues 235 % Identity 23% Template c3e61A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative transcriptional repressor of ribose operon; PDBTitle: crystal structure of a putative transcriptional repressor of ribose2 operon from staphylococcus saprophyticus subsp. saprophyticus Resolution 2.00 Å

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		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	L	V	I	V	P	D	I	C	D	P	F	F	S	E	I	I	R	G	I	E	V	T	A	A	N	H	G	Y	L	V	L	I	G	D	C	A	H	Q	N	Q	Q	E	K	T	F	I	D	L	I	I	T	K	Q	I	D	G	M	L	L	L	G	S	R	L	P	F	D	A	S	I	E	E	Q	R	N	L	P	P
Query Conservation
Alig confidence																																																															.	.
Template Conservation																																																															.	.
Template Sequence		L	I	G	L	L	L	P	D	M	S	N	P	F	F	T	L	I	A	R	G	V	E	D	V	A	L	A	H	G	Y	Q	V	L	I	G	N	S	D	N	D	I	K	K	A	Q	G	Y	L	A	T	F	V	S	H	N	C	T	G	M	I	S	.	.	T	A	F	N	E	N	I	I	E	N	T	L	T	D	H	I	P
Template Known Secondary structure								S		T	T	S																	T	T									T	T															T	T		S					.	.		G	G	G
Template Predicted Secondary structure																																																															.	.
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.			.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	V	M	A	N	E	F	A	P	E	L	E	L	P	T	V	H	I	D	N	L	T	A	A	F	D	A	V	N	Y	L	Y	E	Q	G	H	K	R	I	G	C	I	A	G	P	E	E	M	P	L	C	H	Y	R	L	Q	G	Y	V	Q	A	L	R	R	C	G	I	M	V	D	P	Q	Y	I	A	R	G	D	F	T
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.																																																									.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.																																																									.	.	.	.	.	.
Template Sequence		F	V	F	I	D	R	I	.	.	.	.	.	.	.	.	.	.	.	N	H	F	K	G	G	Q	L	Q	A	E	V	V	R	K	G	K	G	K	N	V	L	I	V	H	E	N	L	L	I	D	A	F	H	Q	R	V	Q	G	I	K	Y	I	L	D	Q	D	Y	K	M	L	E	A	T	L	L	.	.	.	.	.	.
Template Known Secondary structure					G	G	G		.	.	.	.	.	.	.	.	.	.	.																T	T			S						S		T	T	S																							G	G	G	G	.	.	.	.	.	.
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.																																																									.	.	.	.	.	.
Template SS confidence
		140	.	.	.	.	.	.												.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	E	A	G	S	K	A	M	Q	Q	L	L	D	L	P	Q	P	P	T	A	V	F	C	H	S	D	V	M	A	L	G	A	L	S	Q	A	K	R	Q	G	L	K	V	P	E	D	L	S	I	I	G	F	D	N	I	D	L	T	Q	F	C	D	P	P	L	T	T	I	A	Q	P	R	Y	E	I	G	R	E	A	M
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	D	N	D	K	K	F	I	D	L	I	K	E	L	S	I	D	S	I	I	C	S	N	D	L	L	A	I	N	V	L	G	I	V	Q	R	Y	H	F	K	V	P	A	E	I	Q	I	I	G	Y	D	N	I	P	F	S	E	M	T	Y	P	Q	I	T	T	I	D	Q	S	A	Y	H	L	G	E	I	A	V
Template Known Secondary structure		.	.	.	G	S												T							S	S														T	T			T	T	T	T						S	B			G	G	G	G	T	S	S	S			B
Template Predicted Secondary structure		.	.	.
Template SS confidence
					215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	L	L	D	Q	M	Q	G	Q	H	V	G	S	G	S	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	Q	L	L	A	L	T	V	K	H	R	G	S	T	R	H	H
Template Known Secondary structure													T	T
Template Predicted Secondary structure
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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