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Job DescriptionP0ACN7
Confidence100.00%DateThu Jan 5 11:18:37 GMT 2012
Rank12Aligned Residues266
% Identity29%Templatec3c3kA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:alanine racemase; PDBTitle: crystal structure of an uncharacterized protein from actinobacillus2 succinogenes
Resolution1.99 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   66...70.........80.........90.........100.........110.........120.........130.........140.....
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Query Sequence  ESRTILVIVPDICDPFFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRN
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Template Sequence  KTGMLLVMVSNIANPFCAAVVKGIEKTAEKNGYRILLCNTESDLARSRSCLTLLSGKMVDGVITMDALSELPELQNIIG.
Template Known Secondary structure 


S
TTSTT

TT
TTT

S


GGGT.
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   7..10.........20.........30.........40.........50.........60.........70.........80.....
 
   146...150.........160.........170.........180.........190.........200.........210.........220.....
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Query Sequence  LPPMVMANEFAPELELPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARG
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Template Sequence  AFPWVQCAEYDPLSTVSSVSIDDVAASEYVVDQLVKSGKKRIALINHDLAYQYAQHRESGYLNRLKFHGLDYSR. ISYAE
Template Known Secondary structure  TSSSS

TTSSS


TT




TTST



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S
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   86...90.........100.........110.........120.........130.........140.........150......... 160....
 
   226...230.........240.........250.........260.........270.........280.........290.........300.....
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Query Sequence  DFTFEAGSKAMQQLLDLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGR
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Template Sequence  NLDYMAGKLATFSLLKSAVKPDAIFAISDVLAAGAIQALTESGLSIPQDVAVVGFDGVDISQITVPALTTVQQPSEQIGM
Template Known Secondary structure  SSSSSSS

SSSTT

TTTT

SB

GGGGTSSS

B

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   165....170.........180.........190.........200.........210.........220.........230.........240....
 
   306...310.........320.........330.......
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Query Sequence  EAMLLLLDQMQGQHVGSGSRLMDCELIIRGST
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Template Sequence  KAVSLLLEQIHSDV. . . . HHLLPWKFVRRQSS
Template Known Secondary structure  T


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TTT
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   245....250........ .260.........270..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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