Job Description P0ACN7 Confidence 100.00% Date Thu Jan 5 11:18:37 GMT 2012 Rank 17 Aligned Residues 273 % Identity 31% Template c3bblA_ PDB info PDB header:regulatory protein Chain: A: PDB Molecule:regulatory protein of laci family; PDBTitle: crystal structure of a regulatory protein of laci family from2 chloroflexus aggregans Resolution 2.35 Å

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		67	.	.	70	.	.	.	.	.					.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure											.	.	.	.
Query SS confidence											.	.	.	.
Query Sequence		S	R	T	I	L	V	I	V	P	.	.	.	.	D	I	C	D	P	F	F	S	E	I	I	R	G	I	E	V	T	A	A	N	H	G	Y	L	V	L	I	G	D	C	A	H	Q	N	Q	Q	E	K	T	F	I	D	L	I	I	T	K	Q	I	D	G	M	L	L	L	G	S	R	L	P	F	D	A	S	I	E	E
Query Conservation											.	.	.	.
Alig confidence											.	.	.	.
Template Conservation
Template Sequence		S	F	X	I	G	Y	S	W	T	Q	T	E	P	G	Q	V	N	H	I	L	D	Q	F	L	S	S	X	V	R	E	A	G	A	V	N	Y	F	V	L	P	F	P	F	S	E	D	R	S	Q	I	D	I	Y	R	D	L	I	R	S	G	N	V	D	G	F	V	L	S	S	I	N	Y	N	D	P	R	V	Q	F	L
Template Known Secondary structure														T	T		S			T															T	T										S	S	T	T											T	T			S						S			T	T
Template Predicted Secondary structure
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	N	L	P	P	M	V	M	A	N	E	F	A	P	E	L	E	L	P	T	V	H	I	D	N	L	T	A	A	F	D	A	V	N	Y	L	Y	E	Q	G	H	K	R	I	G	C	I	A	G	P	E	E	M	P	L	C	H	Y	R	L	Q	G	Y	V	Q	A	L	R	R	C	G	I	M	V	D	P	Q	Y	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	Q	K	F	P	F	V	A	F	G	R	S	N	P	D	W	D	F	A	W	V	D	I	D	G	T	A	G	T	R	Q	A	V	E	Y	L	I	G	R	G	H	R	R	I	A	I	L	A	W	P	E	D	S	R	V	G	N	D	R	L	Q	G	Y	L	E	A	X	Q	T	A	Q	L	P	I	E	T	G	Y	I
Template Known Secondary structure				T	T							S			S	T	T																									T											T	T																		T	T					G	G	G
Template Predicted Secondary structure
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.			.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																							.	.
Query SS confidence																							.	.
Query Sequence		A	R	G	D	F	T	F	E	A	G	S	K	A	M	Q	Q	L	L	D	L	P	.	.	Q	P	P	T	A	V	F	C	H	S	D	V	M	A	L	G	A	L	S	Q	A	K	R	Q	G	L	K	V	P	E	D	L	S	I	I	G	F	D	N	I	D	L	T	Q	F	C	D	P	P	L	T	T	I	A	Q	P	R
Query Conservation																							.	.
Alig confidence																							.	.
Template Conservation
Template Sequence		L	R	G	E	G	T	F	E	V	G	R	A	X	T	L	H	L	L	D	L	S	P	E	R	R	P	T	A	I	X	T	L	N	D	T	X	A	I	G	A	X	A	A	A	R	E	R	G	L	T	I	G	T	D	L	A	I	I	G	F	D	D	A	P	X	V	Q	Y	L	F	P	P	L	S	S	V	R	Q	P	I
Template Known Secondary structure						S	S													T	S		T	T	T	S		S					S	S														T	T			B	T	T	T	B						S			T	T	G	G	G	S	S	S
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	E	I	G	R	E	A	M	L	L	L	L	D	Q	M	Q	G	Q	H	V	G	S	G	S	R	L	M	D	C	E	L	I	I	R	G	S	T	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	E	A	G	R	K	C	I	E	L	L	V	A	I	V	E	G	R	E	P	E	Q	K	H	I	L	L	Q	P	S	L	I	I	R	A	S	E	G	H
Template Known Secondary structure																	T	T				S													B		S	S	S	B
Template Predicted Secondary structure
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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