Job Description P39834 Confidence 2.49% Date Thu Jan 5 12:01:00 GMT 2012 Rank 38 Aligned Residues 148 % Identity 10% Template c3f83A_ PDB info PDB header:cell adhesion Chain: A: PDB Molecule:fusion of the minor pilin cfae and major pilin cfab; PDBTitle: structure of fusion complex of the minor pilin cfae and major pilin2 cfab of cfa/i pili from etec e. coli Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.					.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																																									.	.	.	.
Query SS confidence																																									.	.	.	.
Query Sequence		G	H	G	I	V	K	F	K	G	E	V	I	S	A	P	C	S	I	K	P	G	D	E	D	L	T	V	N	L	G	E	V	A	D	T	V	L	K	S	.	.	.	.	D	Q	K	S	L	A	E	P	F	T	I	H	L	Q	D	C	M	L	S	Q	G	G	T	T	Y	S	K	A	K	V	T	F	T	T	A	N	T
Query Conservation																																									.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.																			.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.
Template Sequence		G	T	Y	T	I	N	I	T	V	N	L	T	D	.	.	.	.	.	.	.	.	K	G	N	I	Q	I	W	L	P	Q	F	K	S	N	A	R	V	D	L	N	L	R	P	T	G	G	G	T	Y	I	G	R	N	S	V	D	M	C	F	Y	D	G	Y	S	T	N	S	S	S	L	E	I	R	F	Q	D	D	N	S
Template Known Secondary structure															.	.	.	.	.	.	.	.	G	G	G						T	T		S	S													T	T															S	S	T	T			S									S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200									.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.						.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.											140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	T	G	Q	S	D	L	L	K	N	T	K	E	T	E	I	G	G	A	T	G	V	.	.	.	.	.	G	V	R	I	L	D	S	Q	S	G	E	V	T	L	G	T	.	.	.	.	.	.	.	.	.	.	P	V	V	I	T	F	N	N	T	N	S	Y	Q	E	L	N	F	K	A	R	M	E	S	P	S	K	D
Query Conservation																								.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	S	D	G	K	F	Y	L	K	K	I	N	D	D	S	K	E	L	V	Y	T	L	S	L	L	L	A	G	K	N	L	T	P	T	N	G	Q	A	L	N	I	N	T	A	S	L	E	T	N	W	N	R	I	T	A	V	T	M	P	E	I	S	V	P	V	L	C	W	P	G	R	L	Q	L	D	A	K	V	K	N
Template Known Secondary structure			S	S	S							T	T															T	T							T	T							S	T	T											S	S	S	S				S																	S
Template Predicted Secondary structure
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	P	G	N	V	Y	A	Q	A	D	Y	K	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	E	A	G	Q	Y	M	G	N	I	K	I	T	F	T
Template Known Secondary structure				S
Template Predicted Secondary structure
Template SS confidence
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions