Job Description P39834 Confidence 1.69% Date Thu Jan 5 12:01:00 GMT 2012 Rank 57 Aligned Residues 118 % Identity 13% Template c2wmpB_ PDB info PDB header:chaperone Chain: B: PDB Molecule:papg protein; PDBTitle: structure of the e. coli chaperone papd in complex with the pilin2 domain of the papgii adhesin Resolution 2.30 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	C	S	I	K	P	G	D	E	D	L	T	V	N	L	G	E	V	A	D	T	V	L	K	S	D	Q	K	S	L	A	E	P	F	T	I	H	L	Q	D	C	M	L	S	Q	G	G	T	T	Y	S	K	A	K	V	T	F	T	T	A	N	T	M	T	G	Q	S	D	L	L	K	N	T	K	E	T	E	I	G
Query Conservation
Alig confidence													.	.														.	.	.	.											.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.
Template Conservation													.	.														.	.	.	.											.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.
Template Sequence		G	G	C	R	P	S	A	Q	S	L	E	.	.	I	K	H	G	D	L	S	I	N	S	A	N	N	.	.	.	.	H	Y	A	A	Q	T	L	S	V	S	.	.	.	.	.	.	.	C	D	V	P	A	N	I	R	F	M	L	L	R	N	T	T	P	T	Y	S	H	G	K	K	F	.	.	.	.	.	.	.	.
Template Known Secondary structure									S				.	.					S			S	S	S		T	T	.	.	.	.											.	.	.	.	.	.	.		S	S											S	S			S	S			T	T	S		.	.	.	.	.	.	.	.
Template Predicted Secondary structure													.	.														.	.	.	.											.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.			.	.	.	.	210	.	.	.	.	.	.	.	.					.	220	.	.	.	.	.	.	.	.								.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.				.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																															.	.	.
Query SS confidence																															.	.	.
Query Sequence		G	A	T	G	V	G	V	R	I	L	D	S	Q	S	G	E	V	T	L	G	T	P	V	V	I	T	F	N	N	.	.	.	T	N	S	Y	Q	E	L	N	F	K	A	R	M	E	S	P	S	K	D	A	T	P	G	N	V	Y	A	Q	A	D	Y	K	I	A	Y
Query Conservation																															.	.	.
Alig confidence		.	.	.	.	.																									.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	S	V	G	L	G	H	G	W	D	S	I	V	S	V	N	G	V	D	T	G	E	T	T	M	R	W	Y	K	A	G	T	Q	N	L	T	I	G	S	R	L	Y	G	E	S	S	K	I	Q	P	G	V	L	S	G	S	A	T	L	L	M	I	L
Template Known Secondary structure		.	.	.	.	.						T	T								T	T	B		S	S							S	S	S														S							S
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions