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Job DescriptionP64612
Confidence88.16%DateThu Jan 5 12:09:55 GMT 2012
Rank385Aligned Residues93
% Identity18%Templatec3oiyB_
PDB info PDB header:isomeraseChain: B: PDB Molecule:reverse gyrase helicase domain; PDBTitle: helicase domain of reverse gyrase from thermotoga maritima
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20.........30.........40.........50.........60.........70.........80.........90.......
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Query Sequence  SHQPDDVQKEAVSRLEIIYQELINSTPPAPRTSGLMARVGKLWGKREDTKHTPVRGLYMWGGVGRGKTWLMDLFYQSLPG
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Template Sequence  GKDLTGYQRLWAKRIVQ. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GKSFTMVAPTGVGKTTFGMMTALWLAR
Template Known Secondary structure  SS


TT....................................T




SS
TTT
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   76...80.........90.. .......100.........110.........
 
   98.100.. .......110.........120.... .....130.........
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Query Sequence  ERKQR. . . LHFHRFMLRVHEELTALQGQTD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . PLEIIADRFKAETDV
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Template Sequence  KGKKSALVFPTVTLVKQTLERLQKLADEKVKIFGFYSSMKKEEKEKFEKSFEEDDYHILVFSTQFVSKNREKLSQKRFDF
Template Known Secondary structure  TT

SS

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S
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   120.........130.........140.........150.........160.........170.........180.........190.........
 
   140......
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Query Sequence  LCFDEFF
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Template Sequence  VFVDDVD
Template Known Secondary structure  S
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   200......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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