Job Description P64612 Confidence 87.79% Date Thu Jan 5 12:09:55 GMT 2012 Rank 391 Aligned Residues 127 % Identity 19% Template c3exaD_ PDB info PDB header:transferase Chain: D: PDB Molecule:trna delta(2)-isopentenylpyrophosphate PDBTitle: crystal structure of the full-length trna2 isopentenylpyrophosphate transferase (bh2366) from3 bacillus halodurans, northeast structural genomics4 consortium target bhr41. Resolution 2.30 Å

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		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		V	R	G	L	Y	M	W	G	G	V	G	R	G	K	T	W	L	M	D	L	F	Y	Q	S	L	P	G	E	R	K	Q	R	L	H	F	H	R	F	M	L	R	V	H	E	E	L	T	A	L	Q	G	Q	T	D	P	L	E	I	I	A	D	R	F	K	A	E	T	D	V	L	C	F	D	E	F	F	V	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	K	L	V	A	I	V	G	P	T	A	V	G	K	T	K	T	S	V	X	L	A	K	R	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	E	V	I	S	G	D	S	X	Q	V	Y	R	G
Template Known Secondary structure											T	T	S	S											T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T								T	T	T	T	B	T	T
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.																																									.	.	30	.	.	.	.	.	.	.	.	.	40	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		S	D	I	T	D	A	M	L	L	G	G	L	M	K	A	L	F	A	R	G	I	T	L	V	A	T	S	N	I	P	P	D	E	L	Y	R	N	G	L	Q	R	A	R	F	L	P	A	I	D	A	I	K	Q	H	C	D	V	M	N	V	D	A	G	V	D	Y	R	L	R	T	L	T	Q	A	H	L	W	L	S	.
Query Conservation																																																																																	.
Alig confidence													.	.	.	.	.																																																																.
Template Conservation													.	.	.	.	.
Template Sequence		X	D	I	G	T	A	K	I	T	A	E	.	.	.	.	.	E	X	D	G	V	P	H	H	L	I	D	I	K	D	P	S	E	S	F	S	V	A	D	F	Q	D	L	A	T	P	L	I	T	E	I	H	E	R	G	R	L	P	F	L	V	G	G	T	G	L	Y	V	N	A	V	I	H	Q	F	N	L	G	D	I
Template Known Secondary structure				T	T	T	T						.	.	.	.	.			T	T					S	S	S		B		T	T	S																					T	T																		T	T
Template Predicted Secondary structure													.	.	.	.	.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.						.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	H	D	E	T	R	A	Q	M	D	K	L	W	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	A	D	E	D	Y	R	H	E	L	E	A	F	V	N	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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