Return to main results Retrieve Phyre Job Id

Job DescriptionP64612
Confidence97.34%DateThu Jan 5 12:09:55 GMT 2012
Rank99Aligned Residues106
% Identity26%Templatec2yz2B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:putative abc transporter atp-binding protein tm_0222; PDBTitle: crystal structure of the abc transporter in the cobalt transport2 system
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   74.....80.........90....... ..100.........110.........120....
Predicted Secondary structure 








..........................







...
Query SS confidence 























. . . . . . . . . . . . . . . . . . . . . . . . . .


























. . .
Query Sequence  LYMWGGVGRGKTWLMDLFYQSLPG. . . . . . . . . . . . . . . . . . . . . . . . . . ERKQRLHFHRFMLRVHEELTALQGQTD. . .
Query Conservation 


 
 

 


 


 
      ..........................  
 




 

   
  
        ...
Alig confidence 























..........................


























...
Template Conservation    


 








  
 
      
 
   
                                               
Template Sequence  LLVAGNTGSGKSTLLQIVAGLIEPTSGDVLYDGERKKGYEIRRNIGIAFQYPEDQFFAERVFDEVAFAVKNFYPDRDPVP
Template Known Secondary structure 
STT

TTSS

STT

GGG
SSGGGG


SS
TTS
Template Predicted Secondary structure 


















































Template SS confidence 















































































   36...40.........50.........60.........70.........80.........90.........100.........110.....
 
   125....130.........140.... .....150.........160.........170....
Predicted Secondary structure  .............................



.






Query SS confidence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . .



















.





























Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . PLEIIADRFKAETDVLCFDE. FFVSDITDAMLLGGLMKALFARGITLVATS
Query Conservation  .............................     
        


 

.
 
 







  

  
   

 

 

Alig confidence  .............................



















.





























Template Conservation                         

 

 


 




   
 







 


      
   
  
   
 


 

Template Sequence  LVKKAMEFVGLDFDSFKDRVPFFLSGGEKRRVAIASVIVHEPDILILDEPLVGLDREGKTDLLRIVEKWKTLGKTVILIS
Template Known Secondary structure  T

TTS
GGGS
TT

SSTTTT

TT

Template Predicted Secondary structure 



















Template SS confidence 















































































   116...120.........130.........140.........150.........160.........170.........180.........190.....
 
   175....
Predicted Secondary structure 


Query SS confidence 




Query Sequence  NIPPD
Query Conservation 
  
 
Alig confidence 




Template Conservation 
    
Template Sequence  HDIET
Template Known Secondary structure  S
Template Predicted Secondary structure 

Template SS confidence 




   196...200
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions