Return to main results Retrieve Phyre Job Id

Job DescriptionP64612
Confidence97.42%DateThu Jan 5 12:09:55 GMT 2012
Rank93Aligned Residues131
% Identity18%Templatec2qbyA_
PDB info PDB header:replication/dnaChain: A: PDB Molecule:cell division control protein 6 homolog 1; PDBTitle: crystal structure of a heterodimer of cdc6/orc1 initiators2 bound to origin dna (from s. solfataricus)
Resolution3.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   30.........40.........50.........60.........70.........80.........90.........100
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Query Sequence  SRLEIIYQELINSTPPAPRTSGLMARVGKLWGKREDTKHTPVRGLYMWGGVGRGKTWLMDLFYQSLPGERK. . . . . . . . .
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Template Sequence  DQIRKIASIL. . . . . . . . . . . . . . . . . . . . . . . APLYREEKPNNIFIYGLTGTGKTAVVKFVLSKLHKKFLGKFKHVYIN
Template Known Secondary structure  SS.......................GGGGGT





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   38.40....... ..50.........60.........70.........80.........90....
 
   101........110.........120.........130..... ....140.........150.... .....160.........170
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Query Sequence  . . QRLHFHRFMLRVHEELTALQGQTDPLEIIADRFKA. . . . . . . ETDVLCFDEFFVSDITDAM. LLGGLMKALFARGITL
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Template Sequence  TRQIDTPYRVLADLLESLDVKVPFTGLSIAELYRRLVKAVRDYGSQVVIVLDEIDAFVKKYNDDILYKLSRINSEVNKIS
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   95....100.........110.........120.........130.........140.........150.........160.........170....
 
   171........180...
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Query Sequence  VATSNIPPDELYR
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Template Sequence  FIGITNDVKFVDL
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GGGGGG
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   177..180.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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