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Job DescriptionP64612
Confidence97.03%DateThu Jan 5 12:09:55 GMT 2012
Rank117Aligned Residues103
% Identity17%Templatec2pcjB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:lipoprotein-releasing system atp-binding protein lold; PDBTitle: crystal structure of abc transporter (aq_297) from aquifex aeolicus2 vf5
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   74.....80.........90.........100... ......110.........120....
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Query Sequence  LYMWGGVGRGKTWLMDLFYQSLPGERKQRL. . . . . . . . . HFHRFMLRVHEELTALQGQTD. . . . . . . . . . . . . . . . . . . .
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Template Sequence  VSIIGASGSGKSTLLYILGLLDAPTEGKVFLEGKEVDYTNEKELSLLRNRKLGFVFQFHYLIPELTALENVIVPMLKMGK
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TTS
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   33......40.........50.........60.........70.........80.........90.........100.........110..
 
   125....130.........140.... .....150.........160.........
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . PLEIIADRFKAETDVLCFDE. FFVSDITDAMLLGGLMKALFARGIT
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Template Sequence  PKKEAKERGEYLLSELGLGDKLSRKPYELSGGEQQRVAIARALANEPILLFADEPTGNLDSANTKRVMDIFLKINEGGTS
Template Known Secondary structure 
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GGGS
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   113......120.........130.........140.........150.........160.........170.........180.........190..
 
   170......
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Query Sequence  LVATSNI
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Template Sequence  IVMVTHE
Template Known Secondary structure  S
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   193......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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