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Job DescriptionP64612
Confidence87.06%DateThu Jan 5 12:09:55 GMT 2012
Rank398Aligned Residues171
% Identity16%Templatec2og2A_
PDB info PDB header:protein transportChain: A: PDB Molecule:putative signal recognition particle receptor; PDBTitle: crystal structure of chloroplast ftsy from arabidopsis2 thaliana
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.........50.........60......... 70.........80.....
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Query Sequence  SQYLKALNEGSHQPDDVQKEAVSRLEIIYQELINSTPPAPRTSGLMARVGKLWGKREDTKHT. . PVRGLYMWGGVGRGKT
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Template Sequence  ELEEALLVSD. FGPKITVRIVERLREDIMSG. . KLKSGSEIKDALKESVLEMLAKKTELQLGFRKPAVIMIVGVNGGGKT
Template Known Secondary structure  TT.

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   61........70 .........80.........90 .........100.........110.........120.........130.......
 
   86...90.........100. ........110.........120.... .....130.........140.......
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Query Sequence  WLMDLFYQSLPGERKQ. . . . . . . . . RLHFHRFMLRVHEELTALQGQTD. . . . . . . . . PLEIIADRFKAETDVLCFDEFFV
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Template Sequence  TSLGKLAHRLKNEGTKVLMAAGDTFRAAASDQLEIWAERTGCEIVVAEGDKAKAATVLSKAVKRGKEEGYDVVLCDTSGR
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   141........150.........160.........170.........180.........190.........200.........210.........220
 
   148.150..... ....160........ .170.........180.
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Query Sequence  SDITDAML. . LGGLMKALFARGI. . . . . . TLVATSNIPPDEL
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Template Sequence  LHTNYSLMEELIACKKAVGKIVSGAPNEILLVLDGNTGLNML
Template Known Secondary structure  SS

STT

SGGGGGGG
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   221........230.........240.........250.........260..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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