Job Description P64612 Confidence 94.86% Date Thu Jan 5 12:09:55 GMT 2012 Rank 218 Aligned Residues 176 % Identity 15% Template c2j7pA_ PDB info PDB header:signal recognition Chain: A: PDB Molecule:signal recognition particle protein; PDBTitle: gmppnp-stabilized ng domain complex of the srp gtpases ffh2 and ftsy Resolution 1.97 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.				.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																																	.	.	.
Query SS confidence																																																	.	.	.
Query Sequence		P	T	S	Q	Y	L	K	A	L	N	E	G	S	H	Q	P	D	D	V	Q	K	E	A	V	S	R	L	E	I	I	Y	Q	E	L	I	N	S	T	P	P	A	P	R	T	S	G	L	.	.	.	M	A	R	V	G	K	L	W	G	K	R	E	D	T	K	H	T	P	V	R	G	L	Y	M	W	G	G	V	G	R
Query Conservation																																																	.	.	.
Alig confidence																																																	.	.	.
Template Conservation
Template Sequence		T	L	R	E	I	R	R	A	L	M	D	A	D	V	N	L	E	V	A	R	D	F	V	E	R	V	R	E	E	A	L	G	K	Q	V	L	E	S	L	T	P	A	E	V	I	L	A	T	V	Y	E	A	L	K	E	A	L	G	G	E	A	R	L	P	V	L	K	D	R	N	L	W	F	L	V	G	L	Q	G	S
Template Known Secondary structure													T	T																				T	T	T	T	T		S																		T	T	S	S								S	S								S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.										.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.				.	.	120	.	.	.	.	.	.	.	.	.	130	.	.						.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.																	.	.	.																.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.																	.	.	.																.	.	.	.	.
Query Sequence		G	K	T	W	L	M	D	L	F	Y	Q	S	L	P	G	E	R	K	Q	.	.	.	.	.	.	.	.	.	R	L	H	F	H	R	F	M	L	R	V	H	E	E	L	T	.	.	.	A	L	Q	G	Q	T	D	P	L	E	I	I	A	D	R	.	.	.	.	.	F	K	A	E	T	D	V	L	C	F	D	E	F
Query Conservation																					.	.	.	.	.	.	.	.	.																	.	.	.																.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.																	.	.	.																.	.	.	.	.
Template Conservation
Template Sequence		G	K	T	T	T	A	A	K	L	A	L	Y	Y	K	G	K	G	R	R	P	L	L	V	A	A	D	T	Q	R	P	A	A	R	E	Q	L	R	L	L	G	E	K	V	G	V	P	V	L	E	V	M	D	G	E	S	P	E	S	I	R	R	R	V	E	E	K	A	R	L	E	A	R	D	L	I	L	V	D	T	A
Template Known Secondary structure		S														T	T	T											S	S	T	T													T								T	T																	T	T
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		146			.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure			.	.
Query SS confidence			.	.
Query Sequence		F	.	.	V	S	D	I	T	D	A	M	L	L	G	G	L	M	K	A	L	F	A	R	G	I	T	L	V	A	T	S	N	I	P	P	D	E	L
Query Conservation			.	.
Alig confidence			.	.
Template Conservation
Template Sequence		G	R	L	Q	I	D	E	P	L	M	G	E	L	A	R	L	K	E	V	L	G	P	D	E	V	L	L	V	L	D	A	M	T	G	Q	E	A	L
Template Known Secondary structure					T	T																		S								T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions