Return to main results Retrieve Phyre Job Id

Job DescriptionP64612
Confidence94.86%DateThu Jan 5 12:09:55 GMT 2012
Rank218Aligned Residues176
% Identity15%Templatec2j7pA_
PDB info PDB header:signal recognitionChain: A: PDB Molecule:signal recognition particle protein; PDBTitle: gmppnp-stabilized ng domain complex of the srp gtpases ffh2 and ftsy
Resolution1.97 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.. .......60.........70.........80..
Predicted Secondary structure 













...

















Query SS confidence 














































. . .





























Query Sequence  PTSQYLKALNEGSHQPDDVQKEAVSRLEIIYQELINSTPPAPRTSGL. . . MARVGKLWGKREDTKHTPVRGLYMWGGVGR
Query Conservation 
   
   
  
 
  
  
  
   
  
   
             ...                  





 
 

 
Alig confidence 














































...





























Template Conservation   
 

   

  

    
  
   
                  
   
   
   
             

  




 
Template Sequence  TLREIRRALMDADVNLEVARDFVERVREEALGKQVLESLTPAEVILATVYEALKEALGGEARLPVLKDRNLWFLVGLQGS
Template Known Secondary structure  TT

TTTTT
S
TTSS






SS
STTS
Template Predicted Secondary structure 






























Template SS confidence 















































































   30.........40.........50.........60.........70.........80.........90.........100.........
 
   83......90.........100. ........110....... ..120.........130.. .......140.....
Predicted Secondary structure 






............




.....



Query SS confidence 


















. . . . . . . . .















. . .














. . . . .












Query Sequence  GKTWLMDLFYQSLPGERKQ. . . . . . . . . RLHFHRFMLRVHEELT. . . ALQGQTDPLEIIADR. . . . . FKAETDVLCFDEF
Query Conservation 


 


 
        
 .........




 

   
  
 ...            
  .....      


 


Alig confidence 


















.........















...














.....












Template Conservation 




 



      
  
 

  
  
  
 


   
    
                           
 





Template Sequence  GKTTTAAKLALYYKGKGRRPLLVAADTQRPAAREQLRLLGEKVGVPVLEVMDGESPESIRRRVEEKARLEARDLILVDTA
Template Known Secondary structure  STTT




SSTTT



TT

TT



Template Predicted Secondary structure 
























Template SS confidence 















































































   110.........120.........130.........140.........150.........160.........170.........180.........
 
   146 ...150.........160.........170.........180.
Predicted Secondary structure  ..









Query SS confidence 
. .


































Query Sequence  F. . VSDITDAMLLGGLMKALFARGITLVATSNIPPDEL
Query Conservation   ..
 







  

  
   

 

 


  
  
Alig confidence 
..


































Template Conservation 

         

        
    


 
       
Template Sequence  GRLQIDEPLMGELARLKEVLGPDEVLLVLDAMTGQEAL
Template Known Secondary structure 


TT


STT

TT
Template Predicted Secondary structure 















Template SS confidence 





































   190.........200.........210.........220.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions