Job Description P64612 Confidence 97.71% Date Thu Jan 5 12:09:55 GMT 2012 Rank 82 Aligned Residues 126 % Identity 16% Template c2chvE_ PDB info PDB header:dna-binding protein Chain: E: PDB Molecule:replication factor c small subunit; PDBTitle: replication factor c adpnp complex Resolution 4.00 Å

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		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	G	L	Y	M	W	G	G	V	G	R	G	K	T	W	L	M	D	L	F	Y	Q	S	L	P	G	E	R	K	Q	R	L	H	F	H	R	F	M	L	R	V	H	E	E	L	T	A	L	Q	G	Q	T	D	P	L	E	I	I	A	D	R	F	K	A	E	T	D	V	L	C	F	D	E	F	F	V	S	D	I
Query Conservation
Alig confidence																											.
Template Conservation																											.
Template Sequence		I	P	H	L	L	F	S	G	P	P	G	T	G	K	T	A	T	A	I	A	L	A	R	D	L	.	F	G	E	N	W	R	D	N	F	I	E	M	N	A	S	D	E	R	G	I	D	V	V	R	H	K	I	K	E	F	A	R	T	A	P	I	G	G	A	P	F	K	I	I	F	L	D	E	A	D	A	L	T	A
Template Known Secondary structure											T	T	S	S													.		T	T			T	T	T						T	T	S	T	T	S	T	T	T	S	S									S			T	T	T										T	G	G	G	S
Template Predicted Secondary structure																											.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	A	M	L	L	G	G	L	M	K	A	L	F	A	R	G	I	T	L	V	A	T	S	N	I	P	P	D	E	L	Y	R	N	G	L	Q	R	A	R	F	L	P	A	I	D	A	I	K	Q	H	C	D	V	M	N	V	D	A	G	V	D
Query Conservation
Alig confidence															.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	A	Q	A	A	L	R	R	T	M	E	M	Y	.	.	S	K	S	C	R	F	I	L	S	C	N	Y	V	S	R	I	.	.	.	.	.	.	.	.	.	.	.	.	.	I	E	P	I	Q	S	R	C	A	V	F	R	F	K	P	V	P	K
Template Known Secondary structure						T	T	G	G	G	T	S	S	S	.	.	S	S	S								S		G	G	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T
Template Predicted Secondary structure															.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.			130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.														.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions