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Job DescriptionP64612
Confidence98.19%DateThu Jan 5 12:09:55 GMT 2012
Rank60Aligned Residues127
% Identity15%Templatec2c99A_
PDB info PDB header:transcription regulationChain: A: PDB Molecule:psp operon transcriptional activator; PDBTitle: structural basis of the nucleotide driven conformational2 changes in the aaa domain of transcription activator pspf
Resolution1.9 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   68.70.........80.........90.........100.........110.........120.........130.........140.......
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Query Sequence  HTPVRGLYMWGGVGRGKTWLMDLFYQSLPGERKQRLHFHRFMLRVHEELTALQGQTDPLEIIADRFKAETDVLCFDEFFV
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Template Sequence  APLDKPVLIIGERGTGKELIASRLHYLSSRWQGPFISLNCAALNENLLDSELFGHEAKRHPGRFERA. DGGTLFLDELAT
Template Known Secondary structure  TTS
S


TTSSTSTTTTS
GGGS

B



B

T.TTSSGGG
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   26...30.........40.........50.........60.........70.........80.........90.. .......100....
 
   148.150.........160.. .......170.........180.........190.....
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Query Sequence  SDITDAMLLGGLMKA. . . . . . . . . . LFARGITLVATSNIPPDELYRNGLQRARFLPAI
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Template Sequence  APMMVQEKLLRVIEYGELERVGGSQPLQVNVRLVCATNADLPAMVNEGTFRADLLDRL
Template Known Secondary structure  S
S


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   112.......120.........130.........140.........150.........160.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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