Email l.a.kelley@imperial.ac.uk Description P69741 Date Thu Jan 5 12:11:49 GMT 2012 Unique Job ID 4e0f64c439fde4f3

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3rgwS_ 100.0 41 PDB header:oxidoreductase/oxidoreductase Chain: S: PDB Molecule:membrane-bound hydrogenase (nife) small subunit hoxk; PDBTitle: crystal structure at 1.5 a resolution of an h2-reduced, o2-tolerant2 hydrogenase from ralstonia eutropha unmasks a novel iron-sulfur3 cluster 2 c3myrE_ 100.0 48 PDB header:oxidoreductase Chain: E: PDB Molecule:hydrogenase (nife) small subunit hyda; PDBTitle: crystal structure of [nife] hydrogenase from allochromatium vinosum in2 its ni-a state 3 d1wuis1 100.0 45 Fold:HydA/Nqo6-like Superfamily:HydA/Nqo6-like Family:Nickel-iron hydrogenase, small subunit 4 c1h2aS_ 100.0 45 PDB header:oxidoreductase Chain: S: PDB Molecule:hydrogenase; PDBTitle: single crystals of hydrogenase from desulfovibrio vulgaris 5 d1frfs_ 100.0 47 Fold:HydA/Nqo6-like Superfamily:HydA/Nqo6-like Family:Nickel-iron hydrogenase, small subunit 6 d1e3da_ 100.0 42 Fold:HydA/Nqo6-like Superfamily:HydA/Nqo6-like Family:Nickel-iron hydrogenase, small subunit 7 d1yq9a1 100.0 45 Fold:HydA/Nqo6-like Superfamily:HydA/Nqo6-like Family:Nickel-iron hydrogenase, small subunit 8 d1cc1s_ 100.0 37 Fold:HydA/Nqo6-like Superfamily:HydA/Nqo6-like Family:Nickel-iron hydrogenase, small subunit 9 c2wpnA_ 100.0 39 PDB header:oxidoreductase Chain: A: PDB Molecule:periplasmic [nifese] hydrogenase, small subunit; PDBTitle: structure of the oxidised, as-isolated nifese hydrogenase2 from d. vulgaris hildenborough 10 d2fug61 99.6 22 Fold:HydA/Nqo6-like Superfamily:HydA/Nqo6-like Family:Nq06-like 11 c2g4rB_ 90.5 15 PDB header:biosynthetic protein Chain: B: PDB Molecule:molybdopterin biosynthesis mog protein; PDBTitle: anomalous substructure of moga 12 c2e76D_ 85.5 18 PDB header:photosynthesis Chain: D: PDB Molecule:cytochrome b6-f complex iron-sulfur subunit; PDBTitle: crystal structure of the cytochrome b6f complex with tridecyl-2 stigmatellin (tds) from m.laminosus 13 d2nqra3 84.5 14 Fold:Molybdenum cofactor biosynthesis proteins Superfamily:Molybdenum cofactor biosynthesis proteins Family:MoeA central domain-like 14 c2is8A_ 84.2 13 PDB header:structural protein Chain: A: PDB Molecule:molybdopterin biosynthesis enzyme, moab; PDBTitle: crystal structure of the molybdopterin biosynthesis enzyme moab2 (ttha0341) from thermus theromophilus hb8 15 d1y5ea1 83.8 9 Fold:Molybdenum cofactor biosynthesis proteins Superfamily:Molybdenum cofactor biosynthesis proteins Family:MogA-like 16 c2pq4B_ 82.8 60 PDB header:chaperone/oxidoreductase Chain: B: PDB Molecule:periplasmic nitrate reductase precursor; PDBTitle: nmr solution structure of napd in complex with napa1-352 signal peptide 17 c2fynO_ 82.3 23 PDB header:oxidoreductase Chain: O: PDB Molecule:ubiquinol-cytochrome c reductase iron-sulfur PDBTitle: crystal structure analysis of the double mutant rhodobacter2 sphaeroides bc1 complex 18 d1xi8a3 81.1 13 Fold:Molybdenum cofactor biosynthesis proteins Superfamily:Molybdenum cofactor biosynthesis proteins Family:MoeA central domain-like 19 d2ftsa3 80.1 14 Fold:Molybdenum cofactor biosynthesis proteins Superfamily:Molybdenum cofactor biosynthesis proteins Family:MoeA central domain-like 20 c2pjkA_ 77.6 13 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:178aa long hypothetical molybdenum cofactor PDBTitle: structure of hypothetical molybdenum cofactor biosynthesis2 protein b from sulfolobus tokodaii 21 c1p84E_ not modelled 76.7 3 PDB header:oxidoreductase Chain: E: PDB Molecule:ubiquinol-cytochrome c reductase iron-sulfur PDBTitle: hdbt inhibited yeast cytochrome bc1 complex 22 d1jlja_ not modelled 73.0 11 Fold:Molybdenum cofactor biosynthesis proteins Superfamily:Molybdenum cofactor biosynthesis proteins Family:MogA-like 23 c2fu3A_ not modelled 72.2 14 PDB header:biosynthetic protein/structural protein Chain: A: PDB Molecule:gephyrin; PDBTitle: crystal structure of gephyrin e-domain 24 c2nqqA_ not modelled 71.2 15 PDB header:biosynthetic protein Chain: A: PDB Molecule:molybdopterin biosynthesis protein moea; PDBTitle: moea r137q 25 d1ovma1 not modelled 70.6 18 Fold:DHS-like NAD/FAD-binding domain Superfamily:DHS-like NAD/FAD-binding domain Family:Pyruvate oxidase and decarboxylase, middle domain 26 d1uuya_ not modelled 65.5 11 Fold:Molybdenum cofactor biosynthesis proteins Superfamily:Molybdenum cofactor biosynthesis proteins Family:MogA-like 27 d1uz5a3 not modelled 64.2 21 Fold:Molybdenum cofactor biosynthesis proteins Superfamily:Molybdenum cofactor biosynthesis proteins Family:MoeA central domain-like 28 c2fyuE_ not modelled 62.4 14 PDB header:oxidoreductase Chain: E: PDB Molecule:ubiquinol-cytochrome c reductase iron-sulfur subunit, PDBTitle: crystal structure of bovine heart mitochondrial bc1 with jg1442 inhibitor 29 d1mkza_ not modelled 60.1 9 Fold:Molybdenum cofactor biosynthesis proteins Superfamily:Molybdenum cofactor biosynthesis proteins Family:MogA-like 30 c3rfqC_ not modelled 58.9 14 PDB header:biosynthetic protein Chain: C: PDB Molecule:pterin-4-alpha-carbinolamine dehydratase moab2; PDBTitle: crystal structure of pterin-4-alpha-carbinolamine dehydratase moab22 from mycobacterium marinum 31 d2h1qa1 not modelled 57.5 14 Fold:PLP-dependent transferase-like Superfamily:Dhaf3308-like Family:Dhaf3308-like 32 c2wcvI_ not modelled 57.2 24 PDB header:isomerase Chain: I: PDB Molecule:l-fucose mutarotase; PDBTitle: crystal structure of bacterial fucu 33 d1pvda1 not modelled 54.1 16 Fold:DHS-like NAD/FAD-binding domain Superfamily:DHS-like NAD/FAD-binding domain Family:Pyruvate oxidase and decarboxylase, middle domain 34 d2g2ca1 not modelled 52.8 11 Fold:Molybdenum cofactor biosynthesis proteins Superfamily:Molybdenum cofactor biosynthesis proteins Family:MogA-like 35 d1ik6a2 not modelled 51.4 16 Fold:TK C-terminal domain-like Superfamily:TK C-terminal domain-like Family:Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain 36 d2djia1 not modelled 50.1 16 Fold:DHS-like NAD/FAD-binding domain Superfamily:DHS-like NAD/FAD-binding domain Family:Pyruvate oxidase and decarboxylase, middle domain 37 c3ilhA_ not modelled 50.1 17 PDB header:transcription regulator Chain: A: PDB Molecule:two component response regulator; PDBTitle: crystal structure of two component response regulator from cytophaga2 hutchinsonii 38 d1zpda1 not modelled 49.5 20 Fold:DHS-like NAD/FAD-binding domain Superfamily:DHS-like NAD/FAD-binding domain Family:Pyruvate oxidase and decarboxylase, middle domain 39 d1ogda_ not modelled 49.3 16 Fold:RbsD-like Superfamily:RbsD-like Family:RbsD-like 40 c3e7nB_ not modelled 48.6 28 PDB header:transport protein Chain: B: PDB Molecule:d-ribose high-affinity transport system; PDBTitle: crystal structure of d-ribose high-affinity transport system from2 salmonella typhimurium lt2 41 d2f7wa1 not modelled 46.5 17 Fold:Molybdenum cofactor biosynthesis proteins Superfamily:Molybdenum cofactor biosynthesis proteins Family:MogA-like 42 d1wu2a3 not modelled 41.6 14 Fold:Molybdenum cofactor biosynthesis proteins Superfamily:Molybdenum cofactor biosynthesis proteins Family:MoeA central domain-like 43 d2ob5a1 not modelled 40.7 20 Fold:RbsD-like Superfamily:RbsD-like Family:RbsD-like 44 c3mvkA_ not modelled 40.1 20 PDB header:isomerase Chain: A: PDB Molecule:protein fucu; PDBTitle: the crystal structure of fucu from bifidobacterium longum to 1.65a 45 d1ozha1 not modelled 36.6 18 Fold:DHS-like NAD/FAD-binding domain Superfamily:DHS-like NAD/FAD-binding domain Family:Pyruvate oxidase and decarboxylase, middle domain 46 c1ovmC_ not modelled 36.4 18 PDB header:lyase Chain: C: PDB Molecule:indole-3-pyruvate decarboxylase; PDBTitle: crystal structure of indolepyruvate decarboxylase from2 enterobacter cloacae 47 c2wcuB_ not modelled 36.1 24 PDB header:isomerase Chain: B: PDB Molecule:protein fucu homolog; PDBTitle: crystal structure of mammalian fucu 48 d1t9ba1 not modelled 34.1 25 Fold:DHS-like NAD/FAD-binding domain Superfamily:DHS-like NAD/FAD-binding domain Family:Pyruvate oxidase and decarboxylase, middle domain 49 d2r25b1 not modelled 34.0 12 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 50 d1qopa_ not modelled 33.6 16 Fold:TIM beta/alpha-barrel Superfamily:Ribulose-phoshate binding barrel Family:Tryptophan biosynthesis enzymes 51 c3a52A_ not modelled 30.9 29 PDB header:hydrolase Chain: A: PDB Molecule:cold-active alkaline phosphatase; PDBTitle: crystal structure of cold-active alkailne phosphatase from2 psychrophile shewanella sp. 52 c1uz5A_ not modelled 26.8 19 PDB header:molybdopterin biosynthesis Chain: A: PDB Molecule:402aa long hypothetical molybdopterin PDBTitle: the crystal structure of molybdopterin biosynthesis moea2 protein from pyrococcus horikosii 53 d1y6va1 not modelled 26.6 21 Fold:Alkaline phosphatase-like Superfamily:Alkaline phosphatase-like Family:Alkaline phosphatase 54 d1k7ha_ not modelled 25.3 17 Fold:Alkaline phosphatase-like Superfamily:Alkaline phosphatase-like Family:Alkaline phosphatase 55 c2x98A_ not modelled 25.0 21 PDB header:hydrolase Chain: A: PDB Molecule:alkaline phosphatase; PDBTitle: h.salinarum alkaline phosphatase 56 d1xhja_ not modelled 24.4 19 Fold:Alpha-lytic protease prodomain-like Superfamily:Fe-S cluster assembly (FSCA) domain-like Family:NifU C-terminal domain-like 57 c3e2dB_ not modelled 23.7 17 PDB header:hydrolase Chain: B: PDB Molecule:alkaline phosphatase; PDBTitle: the 1.4 a crystal structure of the large and cold-active2 vibrio sp. alkaline phosphatase 58 d2g39a1 not modelled 23.5 15 Fold:NagB/RpiA/CoA transferase-like Superfamily:NagB/RpiA/CoA transferase-like Family:CoA transferase alpha subunit-like 59 c3uhjE_ not modelled 22.2 17 PDB header:oxidoreductase Chain: E: PDB Molecule:probable glycerol dehydrogenase; PDBTitle: crystal structure of a probable glycerol dehydrogenase from2 sinorhizobium meliloti 1021 60 c2jnvA_ not modelled 21.6 24 PDB header:metal transport Chain: A: PDB Molecule:nifu-like protein 1, chloroplast; PDBTitle: solution structure of c-terminal domain of nifu-like2 protein from oryza sativa 61 c1ew2A_ not modelled 19.9 21 PDB header:hydrolase Chain: A: PDB Molecule:phosphatase; PDBTitle: crystal structure of a human phosphatase 62 d1zeda1 not modelled 19.9 21 Fold:Alkaline phosphatase-like Superfamily:Alkaline phosphatase-like Family:Alkaline phosphatase 63 c2iucB_ not modelled 19.7 8 PDB header:hydrolase Chain: B: PDB Molecule:alkaline phosphatase; PDBTitle: structure of alkaline phosphatase from the antarctic2 bacterium tab5 64 c2kveA_ not modelled 19.6 56 PDB header:hormone Chain: A: PDB Molecule:mesencephalic astrocyte-derived neurotrophic factor; PDBTitle: c-terminal domain of mesencephalic astrocyte-derived neurotrophic2 factor (manf) 65 c2zwmA_ not modelled 19.4 25 PDB header:transcription Chain: A: PDB Molecule:transcriptional regulatory protein yycf; PDBTitle: crystal structure of yycf receiver domain from bacillus2 subtilis 66 c2oasA_ not modelled 18.6 26 PDB header:transferase Chain: A: PDB Molecule:4-hydroxybutyrate coenzyme a transferase; PDBTitle: crystal structure of 4-hydroxybutyrate coenzyme a transferase (atoa)2 in complex with coa from shewanella oneidensis, northeast structural3 genomics target sor119. 67 c3nhzA_ not modelled 17.3 16 PDB header:dna binding protein Chain: A: PDB Molecule:two component system transcriptional regulator mtra; PDBTitle: structure of n-terminal domain of mtra 68 d2g2xa1 not modelled 16.9 15 Fold:PUA domain-like Superfamily:PUA domain-like Family:Atu2648/PH1033-like 69 c3iv7B_ not modelled 16.6 13 PDB header:oxidoreductase Chain: B: PDB Molecule:alcohol dehydrogenase iv; PDBTitle: crystal structure of iron-containing alcohol dehydrogenase2 (np_602249.1) from corynebacterium glutamicum atcc 13032 kitasato at3 2.07 a resolution 70 d2ez9a1 not modelled 15.6 14 Fold:DHS-like NAD/FAD-binding domain Superfamily:DHS-like NAD/FAD-binding domain Family:Pyruvate oxidase and decarboxylase, middle domain 71 c2r8bA_ not modelled 15.1 9 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein atu2452; PDBTitle: the crystal structure of the protein atu2452 of unknown function from2 agrobacterium tumefaciens str. c58 72 d1kgsa2 not modelled 14.5 20 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 73 d1ys7a2 not modelled 14.4 21 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 74 d1xhfa1 not modelled 14.2 21 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 75 d1ofcx1 not modelled 14.0 31 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Myb/SANT domain 76 c3fq6A_ not modelled 12.7 25 PDB header:transferase Chain: A: PDB Molecule:methyltransferase; PDBTitle: the crystal structure of a methyltransferase domain from bacteroides2 thetaiotaomicron vpi 77 c3eh7A_ not modelled 12.4 28 PDB header:transferase Chain: A: PDB Molecule:4-hydroxybutyrate coa-transferase; PDBTitle: the structure of a putative 4-hydroxybutyrate coa-transferase from2 porphyromonas gingivalis w83 78 c2zayA_ not modelled 12.4 13 PDB header:signaling protein Chain: A: PDB Molecule:response regulator receiver protein; PDBTitle: crystal structure of response regulator from desulfuromonas2 acetoxidans 79 c2ju5A_ not modelled 11.7 22 PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin disulfide isomerase; PDBTitle: dsbh oxidoreductase 80 d1zh2a1 not modelled 11.6 15 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 81 d1peya_ not modelled 11.5 23 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 82 c2w0yB_ not modelled 11.1 12 PDB header:hydrolase Chain: B: PDB Molecule:alkaline phosphatase; PDBTitle: h.salinarum alkaline phosphatase 83 c2nvvF_ not modelled 11.0 18 PDB header:hydrolase Chain: F: PDB Molecule:acetyl-coa hydrolase/transferase family protein; PDBTitle: crystal structure of the putative acetyl-coa hydrolase/transferase2 pg1013 from porphyromonas gingivalis, northeast structural genomics3 target pgr16. 84 d1evsa_ not modelled 10.9 33 Fold:4-helical cytokines Superfamily:4-helical cytokines Family:Long-chain cytokines 85 c2qvgA_ not modelled 10.7 15 PDB header:transferase Chain: A: PDB Molecule:two component response regulator; PDBTitle: the crystal structure of a two-component response regulator2 from legionella pneumophila 86 c2j48A_ not modelled 10.5 18 PDB header:transferase Chain: A: PDB Molecule:two-component sensor kinase; PDBTitle: nmr structure of the pseudo-receiver domain of the cika2 protein. 87 c2z1dA_ not modelled 10.1 27 PDB header:metal binding protein Chain: A: PDB Molecule:hydrogenase expression/formation protein hypd; PDBTitle: crystal structure of [nife] hydrogenase maturation protein, hypd from2 thermococcus kodakaraensis 88 d1z6na1 not modelled 10.0 20 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase 89 c3d3uA_ not modelled 9.9 30 PDB header:transferase Chain: A: PDB Molecule:4-hydroxybutyrate coa-transferase; PDBTitle: crystal structure of 4-hydroxybutyrate coa-transferase (abft-2) from2 porphyromonas gingivalis. northeast structural genomics consortium3 target pgr26 90 d1c4ea_ not modelled 9.8 34 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:Gurmarin-like Family:Gurmarin, a sweet taste-suppressing polypeptide 91 c3gk7A_ not modelled 9.8 23 PDB header:transferase Chain: A: PDB Molecule:4-hydroxybutyrate coa-transferase; PDBTitle: crystal structure of 4-hydroxybutyrate coa-transferase from2 clostridium aminobutyricum 92 d2a9pa1 not modelled 9.7 19 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 93 d1uhua_ not modelled 9.6 16 Fold:Retroviral matrix proteins Superfamily:Retroviral matrix proteins Family:MMLV matrix protein-like 94 d1omba_ not modelled 9.6 43 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:omega toxin-like Family:Spider toxins 95 d2f6ma1 not modelled 9.5 21 Fold:Long alpha-hairpin Superfamily:Endosomal sorting complex assembly domain Family:VPS23 C-terminal domain 96 d2ar1a1 not modelled 9.4 12 Fold:PUA domain-like Superfamily:PUA domain-like Family:Atu2648/PH1033-like 97 d1xwdb1 not modelled 9.0 25 Fold:Cystine-knot cytokines Superfamily:Cystine-knot cytokines Family:Gonadodropin/Follitropin 98 c2omkB_ not modelled 9.0 19 PDB header:transferase Chain: B: PDB Molecule:hypothetical protein; PDBTitle: structure of the bacteroides thetaiotaomicron thiamin2 pyrophosphokinase 99 c3jteA_ not modelled 9.0 20 PDB header:protein binding Chain: A: PDB Molecule:response regulator receiver protein; PDBTitle: crystal structure of response regulator receiver domain2 protein from clostridium thermocellum