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Job DescriptionA5PFK0
Confidence20.22%DateThu Jan 5 10:55:36 GMT 2012
Rank422Aligned Residues136
% Identity9%Templatec3n7uD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:formate dehydrogenase; PDBTitle: nad-dependent formate dehydrogenase from higher-plant arabidopsis2 thaliana in complex with nad and azide
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MQTPHILIVEDELVTRNTLKSIFEAEGYDVFEATDGAEMHQILSEYDINLVIMDINLPGKNGLLLARELREQANVALMFL
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Template Sequence  ATKNPNFLGCVENAL. . GIRDWLESQGHQYIVTDDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLKLLLTA
Template Known Secondary structure  GGG
TT
TTBTTTGG..G
TT
S

SSTTSTTT
S
TTS


B

TT

S
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   43......50....... ..60.........70.........80.........90.........100.........110.........120
 
   81........90.........100.........110.........120.........130........
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Query Sequence  TGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLSRTMNLGTVSEERRSVESYK
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Template Sequence  GIGSDHIDLQAAAAAGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWN
Template Known Secondary structure  SS

TTB
T

TTSSTTTT


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   121........130.........140.........150.........160.........170........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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