Return to main results Retrieve Phyre Job Id

Job DescriptionA5PFK0
Confidence99.86%DateThu Jan 5 10:55:36 GMT 2012
Rank84Aligned Residues118
% Identity29%Templatec3luaA_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:response regulator receiver protein; PDBTitle: crystal structure of a signal receiver domain of two component signal2 transduction (histidine kinase) from clostridium thermocellum
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20....... ..30.........40...... ...50........ .60.........70. ...
Predicted Secondary structure 








.










.











.

...


Query SS confidence 


























.


















.











.












. . .


Query Sequence  MQTPHILIVEDELVTRNTLKSIFEAEG. YDVFEATDGAEMHQILSEY. DINLVIMDINLP. GKNGLLLARELRE. . . QAN
Query Conservation 
   







      
   
   
.  
  
     

      .  
 



    .   
      

 ...   
Alig confidence 


.






















.


















.











.












...


Template Conservation 
  .






       
   
   
   
  
     

  
      
 

 
        
      

       
Template Sequence  LDG. TVLLIDYFEYEREKTKIIFDNIGEYDFIEVENLKKFYSIFKDLDSITLIIXDIAFPVEKEGLEVLSAIRNNSRTAN
Template Known Secondary structure 


.
S




STTTTT



S
S
SSSSGGGTT
Template Predicted Secondary structure 


.




























Template SS confidence 















































































  
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions