 |
Job Description | A5PFK0 | Confidence | 22.03% | Date | Thu Jan 5 10:55:36 GMT 2012 |
Rank | 402 | Aligned Residues | 65 |
% Identity | 14% | Template | c3kruC_ |
PDB info |
PDB header:oxidoreductase | Chain: C: PDB Molecule:nadh:flavin oxidoreductase/nadh oxidase; |
PDBTitle: crystal structure of the thermostable old yellow enzyme from2 thermoanaerobacter pseudethanolicus e39
|
Resolution | 1.60 Å |
|
 |
  |   |
37 | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . |
Predicted Secondary structure |   |
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | E | M | H | Q | I | L | S | E | Y | D | I | N | L | V | I | M | D | I | N | L | P | G | K | N | G | L | L | L | A | R | E | L | R | E | Q | A | N | V | A | L | M | F | L | T | G | R | D | N | E | V | D | K | I | L | G | L | E | I | G | A | D | D | Y | I |
Query Conservation |   |
  |   |
|
|   |   |   |   |   |   |   |   |
|   |
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|   |
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |
|
|
|
|   |   |
|
|
|   |   |   |
|   |
|   |   |   |
|   |   |
|   |   |
|   |
|
Template Sequence |   |
K | D | K | V | D | L | I | D | V | S | S | G | G | L | L | N | V | D | I | N | L | Y | P | G | Y | Q | V | K | Y | A | E | T | I | K | K | R | C | N | I | K | T | S | A | V | G | L | I | T | T | Q | E | L | A | E | E | I | L | S | N | E | R | A | D | L | V |
Template Known Secondary structure |   |
T | T | T |
| S |  |  |  |  |  |
|
|
| S | S |
|
|
|
|
|
|
| T | T | T | T |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |
| S | S |
|
|
|  |  |  |  |  |  |  |  |  | T | T | S |
| S |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|