Job Description A5PFK0 Confidence 49.61% Date Thu Jan 5 10:55:36 GMT 2012 Rank 258 Aligned Residues 93 % Identity 20% Template c3c85A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:putative glutathione-regulated potassium-efflux system PDBTitle: crystal structure of trka domain of putative glutathione-regulated2 potassium-efflux kefb from vibrio parahaemolyticus Resolution 1.90 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																.	.
Query SS confidence																																.	.
Query Sequence		P	H	I	L	I	V	E	D	E	L	V	T	R	N	T	L	K	S	I	F	E	A	E	G	Y	D	V	F	E	A	.	.	T	D	G	A	E	M	H	Q	I	L	S	E	Y	D	I	N	L	V	I	M	D	I	N	L	P	G	K	N	G	L	L	L	A	R	E	L	R	E	Q	A	N	V	A	L	M	F	L	T
Query Conservation																																.	.
Alig confidence													.	.	.	.																.	.																																															.	.
Template Conservation													.	.	.	.																																																																.	.
Template Sequence		K	I	S	L	G	I	E	I	R	E	E	.	.	.	.	A	A	Q	Q	H	R	S	E	G	R	N	V	I	S	G	D	A	T	D	P	D	F	W	E	R	I	L	D	T	G	H	V	K	L	V	L	L	A	X	P	H	H	Q	G	N	Q	T	A	L	E	Q	L	Q	R	R	N	Y	K	G	Q	I	A	A	.	.
Template Known Secondary structure		S							S				.	.	.	.								T	T								T	T							T	B		S												S	S														T	T			S					.	.
Template Predicted Secondary structure													.	.	.	.																																																																.	.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70					.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	D	N	E	V	D	K	I	L	G	L	E	I	G	A	D	D	Y	I	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	A	E	Y	P	D	Q	L	E	G	L	L	E	S	G	V	D	A	A	F	N
Template Known Secondary structure				S	S											T		S
Template Predicted Secondary structure
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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