Job Description A5PFK0 Confidence 99.53% Date Thu Jan 5 10:55:36 GMT 2012 Rank 116 Aligned Residues 132 % Identity 21% Template c3c3wB_ PDB info PDB header:transcription Chain: B: PDB Molecule:two component transcriptional regulatory protein devr; PDBTitle: crystal structure of the mycobacterium tuberculosis hypoxic response2 regulator dosr Resolution 2.20 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.			.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																										.	.																																												.
Query SS confidence																										.	.																																												.
Query Sequence		H	I	L	I	V	E	D	E	L	V	T	R	N	T	L	K	S	I	F	E	A	E	G	Y	.	.	D	V	F	E	A	T	D	G	A	E	M	H	Q	I	L	S	E	Y	D	I	N	L	V	I	M	D	I	N	L	P	G	K	N	G	L	L	L	A	R	E	L	R	E	.	Q	A	N	V	A	L	M	F	L	T
Query Conservation																										.	.																																												.
Alig confidence																										.	.																																												.
Template Conservation
Template Sequence		K	V	F	L	V	D	D	H	E	V	V	R	R	G	L	V	D	L	L	G	A	D	P	E	L	D	V	V	G	E	A	G	S	V	A	E	A	M	A	R	V	P	A	A	R	P	D	V	A	V	L	D	V	R	L	P	D	G	N	G	I	E	L	C	R	D	L	L	S	R	M	P	D	L	R	C	L	I	L	T
Template Known Secondary structure								S														T		T	T								S	S														S						S			T	T														S	T	T						G	G
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	D	N	E	V	D	K	I	L	G	L	E	I	G	A	D	D	Y	I	T	K	P	F	N	P	R	E	L	T	I	R	A	R	N	L	L	S	R	T	M	N	L	G	T	V	S	E	E	R	R	S	V	E	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	Y	T	S	D	E	A	M	L	D	A	I	L	A	G	A	S	G	Y	V	V	K	D	I	K	G	M	E	L	A	R	A	V	K	D	V	G	A	G	R	S	L	L	D	N	R	A	A	A	A	L	M	A	K	L
Template Known Secondary structure		G	S	S	S											T																									G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions