Return to main results Retrieve Phyre Job Id

Job DescriptionA5PFK0
Confidence72.34%DateThu Jan 5 10:55:36 GMT 2012
Rank186Aligned Residues108
% Identity12%Templatec3axtA_
PDB info PDB header:transferaseChain: A: PDB Molecule:probable n(2),n(2)-dimethylguanosine trna methyltransferase PDBTitle: complex structure of trna methyltransferase trm1 from aquifex aeolicus2 with s-adenosyl-l-methionine
Resolution2.49 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20........ .30.........40.........50.........60.........70.........80
Predicted Secondary structure 





....
































Query SS confidence 























. . . .



















































Query Sequence  HILIVEDELVTRNTLKSIFEAEGY. . . . DVFEATDGAEMHQILSEYDINLVIMDINLPGKNGLLLARELREQANVALMFL
Query Conservation 







      
   
   
 .... 
  
     

        
 



       
      

      

  
Alig confidence 























....

























..























Template Conservation   
 
 


  

  
  
   


    
 
   

   
       






..



   




   

 



 
Template Sequence  KAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDLD. . PFGTPVPFIESVALSMKRGGILSL
Template Known Secondary structure 
S
TT

GGG
S
TS

SS

..
SS

Template Predicted Secondary structure 

















..







Template SS confidence 















































































   7980.........90.........100.........110.........120.........130.. .......140.........150......
 
   81........90.........100....... ..110....
Predicted Secondary structure 












...
Query SS confidence 


























. . .






Query Sequence  TGRDNEVDKILGLEIGADDYITKPFNP. . . RELTIRA
Query Conservation 
          
   

 


 

   ...  
   
Alig confidence 


























...






Template Conservation 



   
 
         

          
  


Template Sequence  TATDTAPLSGTYPKTCMRRYMARPLRNEFKHEVGIRI
Template Known Secondary structure 

TTSS
SB


STT
Template Predicted Secondary structure 













Template SS confidence 




































   157..160.........170.........180.........190...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions