Job Description A5PFK0 Confidence 99.85% Date Thu Jan 5 10:55:36 GMT 2012 Rank 86 Aligned Residues 119 % Identity 24% Template c2qv0A_ PDB info PDB header:transcription Chain: A: PDB Molecule:protein mrke; PDBTitle: crystal structure of the response regulatory domain of2 protein mrke from klebsiella pneumoniae Resolution 2.40 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80
Predicted Secondary structure																												.	.																																											.
Query SS confidence																												.	.																																											.
Query Sequence		P	H	I	L	I	V	E	D	E	L	V	T	R	N	T	L	K	S	I	F	E	A	E	G	Y	D	.	.	V	F	E	A	T	D	G	A	E	M	H	Q	I	L	S	E	Y	D	I	N	L	V	I	M	D	I	N	L	P	G	K	N	G	L	L	L	A	R	E	L	R	E	.	Q	A	N	V	A	L	M	F	L
Query Conservation																												.	.																																											.
Alig confidence																												.	.																																											.
Template Conservation
Template Sequence		M	K	V	I	I	V	E	D	E	F	L	A	Q	Q	E	L	S	W	L	I	N	T	H	S	Q	M	E	I	V	G	S	F	D	D	G	L	D	V	L	K	F	L	Q	H	N	K	V	D	A	I	F	L	D	I	N	I	P	S	L	D	G	V	L	L	A	Q	N	I	S	Q	F	A	H	K	P	F	I	V	F	I
Template Known Secondary structure									S																S									S															S						S	S		S	S	S										T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	R	D	N	E	V	D	K	I	L	G	L	E	I	G	A	D	D	Y	I	T	K	P	F	N	P	R	E	L	T	I	R	A	R	N	L	L	S	R	T	M	N	L
Query Conservation
Alig confidence							.	.
Template Conservation							.	.
Template Sequence		T	A	W	K	E	.	.	H	A	V	E	A	F	E	L	E	A	F	D	Y	I	L	K	P	Y	Q	E	S	R	I	I	N	M	L	Q	K	L	T	T	A	W	E	Q	Q
Template Known Secondary structure			S			T	.	.	T							T	T		S					S	S
Template Predicted Secondary structure							.	.
Template SS confidence
		138	.	140	.	.			.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions