Return to main results Retrieve Phyre Job Id

Job DescriptionA5PFK0
Confidence93.71%DateThu Jan 5 10:55:36 GMT 2012
Rank133Aligned Residues32
% Identity16%Templatec2hwvA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:dna-binding response regulator vicr; PDBTitle: crystal structure of an essential response regulator dna binding2 domain, vicrc in enterococcus faecalis, a member of the yycf3 subfamily.
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   137..140.........150.........160.........
Predicted Secondary structure 










Query SS confidence 
































Query Sequence  YKFNGWELDINSRSLIGPDGEQYKLPRSEFRAM
Query Conservation                        
 

  
  

Alig confidence 













.

















Template Conservation 
  
    
     .
      
 

  
  

Template Sequence  MTIGDLTIHPDAYM. VSKRGEKIELTHREFELL
Template Known Secondary structure  TT
SSSS.TT

Template Predicted Secondary structure 





.



Template SS confidence 
































   134.....140....... ..150.........160.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions