Job Description A5PFK0 Confidence 70.66% Date Thu Jan 5 10:55:36 GMT 2012 Rank 193 Aligned Residues 96 % Identity 11% Template c2ekcA_ PDB info PDB header:lyase Chain: A: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: structural study of project id aq_1548 from aquifex aeolicus vf5 Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.				.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																														.	.	.
Query SS confidence																														.	.	.
Query Sequence		I	L	I	V	E	D	E	L	V	T	R	N	T	L	K	S	I	F	E	A	E	G	Y	D	V	F	E	A	.	.	.	T	D	G	A	E	M	H	Q	I	L	S	E	Y	D	I	N	L	V	I	M	D	I	N	L	P	G	K	N	G	L	L	L	A	R	E	L	R	E	Q	A	N	V	A	L	M	F	L	T	G
Query Conservation																														.	.	.
Alig confidence																														.	.	.
Template Conservation
Template Sequence		F	I	V	P	D	L	P	P	E	E	A	E	E	L	K	A	V	M	K	K	Y	V	L	S	F	V	P	L	G	A	P	T	S	T	R	K	R	I	K	L	I	C	E	A	A	D	E	M	T	Y	F	V	S	V	T	G	Y	E	R	I	K	K	K	V	E	E	Y	R	E	L	C	D	K	P	V	V	V	G	F	G
Template Known Secondary structure					T	T																T	T									T	T														S	S						S	S																			S						S	S
Template Predicted Secondary structure
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	N	E	V	D	K	I	L	G	L	E	I	G	A	D	D	Y	I	T
Query Conservation
Alig confidence									.
Template Conservation									.
Template Sequence		V	S	K	K	E	H	A	.	R	E	I	G	S	F	A	D	G	V	V	V
Template Known Secondary structure				S					.					T	T	S	S
Template Predicted Secondary structure									.
Template SS confidence
		215	.	.	.	.	220	.		.	.	.	.	.	.	.	.	230	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions