Return to main results Retrieve Phyre Job Id

Job DescriptionA5PFK0
Confidence43.73%DateThu Jan 5 10:55:36 GMT 2012
Rank276Aligned Residues95
% Identity12%Templatec1z0zC_
PDB info PDB header:transferaseChain: C: PDB Molecule:probable inorganic polyphosphate/atp-nad kinase; PDBTitle: crystal structure of a nad kinase from archaeoglobus2 fulgidus in complex with nad
Resolution2.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
Predicted Secondary structure 










































Query SS confidence 















































































Query Sequence  PHILIVEDELVTRNTLKSIFEAEGYDVFEATDGAEMHQILSEYDINLVIMDINLPGKNGLLLARELREQANVALMFLTGR
Query Conservation   







      
   
   
  
  
     

        
 



       
      

      

  
  
Alig confidence 





































.....







....






















..
Template Conservation 

  

 
       
   
                  .....  
 

 
....




 
 
        





..
Template Sequence  MRAAVVYKTDGHVKRIEEALKRLEVEVELFNQPSEELE. . . . . NFDFIVSV. . . . GGDGTILRILQKLKRCPPIFGIN. .
Template Known Secondary structure 
SSSSTTTT
SS

GGGG.....GSS....SSTT
SS



..
Template Predicted Secondary structure 











.....


....








..
Template SS confidence 















































































   1........10.........20.........30........ .40...... ...50.........60.........
 
   84.....90.........100.........110.........120.
Predicted Secondary structure 









Query SS confidence 





































Query Sequence  DNEVDKILGLEIGADDYITKPFNPRELTIRARNLLSRT
Query Conservation          
   

 


 

     
   
   
 
 
Alig confidence  ...........







.

















Template Conservation  ........... 
 



 .          
       
Template Sequence  . . . . . . . . . . . TGRVGLLT. HASPENFEVELKKAVEKF
Template Known Secondary structure  ...........
SS

SS
.
B
TTTT
Template Predicted Secondary structure  ...........







.





Template SS confidence 





































   70....... ..80.........90.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions