Job Description A5PFK0 Confidence 35.35% Date Thu Jan 5 10:55:36 GMT 2012 Rank 306 Aligned Residues 82 % Identity 10% Template c1r8jB_ PDB info PDB header:circadian clock protein Chain: B: PDB Molecule:kaia; PDBTitle: crystal structure of circadian clock protein kaia from2 synechococcus elongatus Resolution 2.03 Å

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		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.
Predicted Secondary structure				.																																																																						.
Query SS confidence				.																																																																						.
Query Sequence		M	Q	.	T	P	H	I	L	I	V	E	D	E	L	V	T	R	N	T	L	K	S	I	F	E	A	E	G	Y	D	V	F	E	A	T	D	G	A	E	M	H	Q	I	L	S	E	Y	D	I	N	L	V	I	M	D	I	N	L	P	G	K	N	G	L	L	L	A	R	E	L	R	E	.	Q	A	N	V	A	L	M
Query Conservation				.																																																																						.
Alig confidence				.																																																																						.
Template Conservation
Template Sequence		V	L	S	Q	I	A	I	C	I	W	V	E	S	T	A	I	L	Q	D	C	Q	R	A	L	S	A	D	R	Y	Q	L	Q	V	C	E	S	G	E	M	L	L	E	Y	A	Q	T	H	R	D	Q	I	D	C	L	I	L	V	A	A	N	P	S	F	R	A	V	V	Q	Q	L	C	F	E	G	V	V	V	P	A	I
Template Known Secondary structure																									T		S	T	T								S											S	T	T	S		S						T	T	S	T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		79	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	T	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	G	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions