Job Description A5PFK0 Confidence 94.40% Date Thu Jan 5 10:55:36 GMT 2012 Rank 127 Aligned Residues 134 % Identity 11% Template c1bmtB_ PDB info PDB header:methyltransferase Chain: B: PDB Molecule:methionine synthase; PDBTitle: how a protein binds b12: a 3.o angstrom x-ray structure of2 the b12-binding domains of methionine synthase Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.					10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.				.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure										.	.	.	.																							.	.	.																													.	.													.
Query SS confidence										.	.	.	.																							.	.	.																													.	.													.
Query Sequence		Q	T	P	H	I	L	I	V	.	.	.	.	E	D	E	L	V	T	R	N	T	L	K	S	I	F	E	A	E	G	Y	D	V	F	.	.	.	E	A	T	D	G	A	E	M	H	Q	I	L	S	E	Y	D	I	N	L	V	I	M	D	I	N	L	P	G	.	.	K	N	G	L	L	L	A	R	E	L	R	E	.
Query Conservation										.	.	.	.																							.	.	.																													.	.													.
Alig confidence										.	.	.	.																							.	.	.																													.	.													.
Template Conservation
Template Sequence		T	N	G	K	M	V	I	A	T	V	K	G	D	V	H	D	I	G	K	N	I	V	G	V	V	L	Q	C	N	N	Y	E	I	V	D	L	G	V	M	V	P	A	E	K	I	L	R	T	A	K	E	V	N	A	D	L	I	G	L	S	G	L	I	T	P	S	L	D	E	M	V	N	V	A	K	E	M	E	R	Q
Template Known Secondary structure			S									T	T																T	T	S								S	S														T		S								S																	T
Template Predicted Secondary structure
Template SS confidence
		745	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.				.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure																									.	.	.
Query SS confidence																									.	.	.
Query Sequence		Q	A	N	V	A	L	M	F	L	T	G	R	D	N	E	V	D	K	I	L	G	L	E	.	.	.	I	G	A	D	D	Y	I	T	K	P	F	N	P	R	E	L	T	I	R	A	R	N	L	L	S	R	T	M	N	L	G	T	V	S	E	E	R	R	S	V	E
Query Conservation																									.	.	.
Alig confidence																									.	.	.
Template Conservation
Template Sequence		G	F	T	I	P	L	L	I	G	G	A	T	T	S	K	A	H	T	A	V	K	I	E	Q	N	Y	S	G	P	T	V	Y	V	Q	N	A	S	R	T	V	G	V	V	A	A	L	L	S	D	T	Q	R	D	D	F	V	A	R	T	R	K	E	Y	E	T	V	R
Template Known Secondary structure		T			S						S	T	T									T	T	G	G	G		S	S							S														T	T	T
Template Predicted Secondary structure
Template SS confidence
		825	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions