|   |
410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | D | E | Q | I | D | I | K | K | E | L | Y | Q | I | K | D | Y | I | A | I | E | Q | A | R | F | G | D | K | L | T | V | I | Y | D | I | D | E | E | V | N | C | C | I | P | S | L | L | I | Q | P | L | V | E | N | A | I | V | H | G | I | Q | P | C | K | G | K | G | V | V | T | I | S | V | A | E | C | G | N | R | V |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |
|
|
|   |
|
|
|   |
|
|   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|
|   |
|
|
|   |
|
|
|   |   |   | . |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
D | H | V | P | V | D | I | T | D | L | L | D | R | A | A | H | D | A | A | R | I | Y | P | D | L | . |
. |
. |
. |
D | V | S | L | V | P | S | P | T | C | I | I | V | G | L | P | A | G | L | R | L | A | V | D | N | A | I | A | N | A | V | K | H | G | . |
G | A | T | L | V | Q | L | S | A | V | S | S | R | A | G | V |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | T | T |
| . | . | . | . |  |  |  |  |
| S |
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | . |
|
| S |  |  |  |  |  |  |  |  |  | T | T |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | |
|
|
|
. | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | |
. | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . |
  |
  |   |
490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | I | A | V | R | D | T | G | H | G | I | D | P | K | V | I | E | R | V | E | A | N | E | M | P | G | N | K | I | G | L | L | N | V | H | H | R | V | K | L | L | Y | G | E | G | L | H | I | R | R | L | E | P | G | T | E | I | A | F | Y | I | P | N |
Query Conservation |   |
  |
|   |
|   |
|   |
|   |
|
|   |   |   |   |   |   |   |
|
|   |   |
|   |   |
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |
|
|   |
|   |
|   |
|   |   |
|   |
|
|   |
|   |
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |
|   |   |
| . | . | . | . |
|
|
|
|   |
|   |   |   |
|   |   |   |   |
|
|   |
|   |
|   |
|   |   |   |   |
|
|   |   |   |
|   |
|
|
|
Template Sequence |   |
E | I | A | I | D | D | N | G | S | G | V | P | E | G | E | R | Q | V | V | F | E | R | F | . |
. |
. |
. |
S | L | G | L | A | L | V | A | Q | Q | A | Q | L | H | G | G | T | A | S | L | E | N | S | P | L | G | G | A | R | L | V | L | R | L | P | G |
Template Known Secondary structure |   |
 |  |  |  |  |  | S | S | S |
|
|
| G | G | G |  |  |  |  |  | T | S |
| . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |
| T | T | S | S |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
| . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
375 | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | |
|
|
|
. | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . |
  |