Return to main results Retrieve Phyre Job Id

Job DescriptionP0AA93
Confidence99.92%DateThu Jan 5 11:12:15 GMT 2012
Rank12Aligned Residues139
% Identity17%Templated1gkza2
SCOP infoATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase alpha-ketoacid dehydrogenase kinase, C-terminal domain
Resolution2.2

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   414.....420.........430.... .....440.........450.........460.........470..... ....480....
Predicted Secondary structure 
.















........
Query SS confidence 




















.








































. . . . . . . .








Query Sequence  IDIKKELYQIKDYIAIEQARF. GDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGK. . . . . . . . GVVTISVAE
Query Conservation    
   
  
           .   
 
         
  
   
 


 


 

       ........
 
 
    
Alig confidence 




















.








































........








Template Conservation       

   
                
 
          
   
  

 


 


                
 
    
Template Sequence  LSPKKIIEKWVDFARRLCEHKYGNAPRVRINGHVAARFPFIPMPLDYILPELLKNAMRATMESHLDTPYNVPDVVITIAN
Template Known Secondary structure 
S



STT



T
TT
TTS


Template Predicted Secondary structure 




















Template SS confidence 















































































   195....200.........210.........220.........230.........240.........250.........260.........270....
 
   485....490.........500.........510.... .....520.........530.........540.........550..
Predicted Secondary structure 













.....












Query SS confidence 





























. . . . .





































Query Sequence  CGNRVRIAVRDTGHGIDPKVIERVEANEMP. . . . . GNKIGLLNVHHRVKLLYGEGLHIRRLEPGTEIAFYIPN
Query Conservation      
 
 
 
 
 

       

  
  .....





      
   

 
 
 
  
 

 
 
 

 
Alig confidence 





























.....





































Template Conservation        
 
 
 
 

       


   
     
 



 
        

 
 
 
  
 

   
 
  
Template Sequence  NDVDLIIRISDRGGGIAHKDLDRVMDYHFTTAPMHGFGFGLPTSRAYAEYLGGSLQLQSLQGIGTDVYLRLRH
Template Known Secondary structure 
SS

S



TTTTTTTTSTT





S
SS
TT
TTT
Template Predicted Secondary structure 


























Template SS confidence 








































































   275....280.........290.........300.........310.........320.........330.........340.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions