|   |
408 | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | |
450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
| . |
|  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | K | D | D | E | Q | I | D | I | K | K | E | L | Y | Q | I | K | D | Y | I | A | I | E | Q | A | R | F | G | D | K | L | T | V | I | Y | D | I | D | E | E | V | N | . |
C | C | I | P | S | L | L | I | Q | P | L | V | E | N | A | I | V | H | G | I | Q | P | C | K | G | K | G | V | V | T | I | S | V | A | E | C | G |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   | . |
|   |   |
|   |   |   |
|   |
|
|
|   |
|
|
|   |
|
|   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|   |   |
|
|   |   |   |
|   |   |   |
|   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|
|   |
|
|
|   |
|
|
|   |   |   | . | . |   |   |   |
|   |
|   |   |   |   |   |   |
Template Sequence |   |
E | M | P | M | E | M | A | D | L | N | A | V | L | G | E | V | I | A | A | E | . |
. |
. |
. |
. |
. |
S | G | Y | E | R | E | I | E | T | A | L | Y | P | G | S | I | E | V | K | M | H | P | L | S | I | K | R | A | V | A | N | M | V | V | N | A | A | R | Y | G | . |
. |
N | G | W | I | K | V | S | S | G | T | E | P |
Template Known Secondary structure |   |
|
|
| S |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |
| S | S | S |
|
|  |  |  |  |
|
| S | S |
|
|
|  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| . | . |
| S |
|  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |
|
| . | . |
|
|  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
293 | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | |
|
|
|
|
|
. | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | |
|
. | . | . | . | . | . | . | 360 | . | . | . | . |
  |
  |   |
487 | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | R | V | R | I | A | V | R | D | T | G | H | G | I | D | P | K | V | I | E | R | V | E | A | N | E | M | . |
. |
. |
. |
. |
. |
. |
. |
P | G | N | K | I | G | L | L | N | V | H | H | R | V | K | L | L | Y | G | E | G | L | H | I | R | R | L | E | P | G | T | E | I | A | F | Y | I | P | N | Q | R | T | P | V | A |
Query Conservation |   |
  |   |
|   |
|   |
|   |
|   |
|   |
|
|   |   |   |   |   |   |   |
|
|   |   |
|   | . | . | . | . | . | . | . | . |   |
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |
|
|   |
|   |
|   |
|   |   |
|   |
|
|   |
|   |
|   |
|
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|   |
|   |   |   |
|
|   |   |   |
|
|   |
|   |
|   |
|   |   |   |   |
|
|   |
|   |
|   |
|
|   |   |   |   |   |   |   |
Template Sequence |   |
N | R | A | W | F | Q | V | E | D | D | G | P | G | I | A | P | E | Q | R | K | H | L | F | Q | P | F | V | R | G | D | S | A | R | T | I | S | G | T | G | L | G | L | A | I | V | Q | R | I | V | D | N | H | N | G | M | L | E | L | G | T | S | E | R | G | G | L | S | I | R | A | W | L | P | V | P | V | T | R | A | Q |
Template Known Secondary structure |   |
T |  |  |  |  |  |  |  |  |  | S | S |
| S |
| T | T | G | G | G |
| S | S |
|
|
|
|
|
| S |
|
|
|
|
|
|
|
| S |
|
|
|
| T | T |  |  |  |  |  |  |  | T | S |  |  |  |  |  |  |  | T | T | T |  |  |  |  |  |  |  |  |
|
|
| S |
|
|
|
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |
|
|
|
|
|  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
365 | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . |
  |
  |   |
559 | 560 | . | . |
Predicted Secondary structure |   |
|
|
|
|
Query SS confidence |   |
|
|
|
|
Query Sequence |   |
S | Q | A | T |
Query Conservation |   |
  |   |   |   |
Alig confidence |   |
|
|
|
|
Template Conservation |   |
  |   |   |   |
Template Sequence |   |
G | T | T | K |
Template Known Secondary structure |   |
|
|
|
|
Template Predicted Secondary structure |   |
|
|
|
|
Template SS confidence |   |
|
|
|
|
  |   |
445 | . | . | . |
  |