Job Description P0AA93 Confidence 87.48% Date Thu Jan 5 11:12:15 GMT 2012 Rank 97 Aligned Residues 121 % Identity 14% Template c3o5yA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:sensor protein; PDBTitle: the crystal structure of the gaf domain of a two-component sensor2 histidine kinase from bacillus halodurans to 2.45a Resolution 2.45 Å

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		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.				.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.																															.	.	.	.	.
Query SS confidence																																												.	.	.																															.	.	.	.	.
Query Sequence		E	S	L	R	K	V	C	E	I	I	R	D	D	I	H	A	D	A	V	A	I	T	N	T	D	H	V	L	A	Y	V	G	V	G	E	H	N	Y	Q	N	G	D	.	.	.	D	F	I	S	P	T	T	R	Q	A	M	N	Y	G	K	I	I	I	K	N	N	D	E	A	H	R	T	P	E	I	.	.	.	.	.
Query Conservation																																												.	.	.																															.	.	.	.	.
Alig confidence																																												.	.	.																															.	.	.	.	.
Template Conservation
Template Sequence		N	N	X	I	D	K	L	K	L	L	V	H	F	D	R	I	S	F	L	L	L	A	N	E	T	L	K	L	S	H	V	Y	P	K	G	S	H	S	L	D	I	G	S	T	I	P	K	E	Q	S	L	Y	W	S	A	L	D	Q	R	Q	T	I	F	R	S	L	T	D	T	Q	D	N	F	Y	E	K	Q	Y	L	A
Template Known Secondary structure												S			S									T	T									S	T	T			S	S		T	T					S	T	T										T	S						S			T	T				T	T
Template Predicted Secondary structure
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
						298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	H	S	M	L	V	I	P	L	W	E	K	G	V	V	T	G	T	L	K	I	Y	Y	C	H	A	H	Q	I	T	S	S	L	Q	E	M	A	V	G	L	S	Q	I	I	S	T	Q	L	E	V
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		I	L	D	L	K	S	I	L	V	I	P	I	Y	S	K	N	K	R	V	G	V	L	S	I	G	R	K	Q	Q	I	D	W	S	L	D	D	L	A	F	L	E	Q	L	T	D	H	L	A	V	S	I	E	N
Template Known Secondary structure		T	T	T												S	S											S	S																									T
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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