Job Description P0AA93 Confidence 84.64% Date Thu Jan 5 11:12:15 GMT 2012 Rank 98 Aligned Residues 128 % Identity 6% Template c3eeaB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:gaf domain/hd domain protein; PDBTitle: the crystal structure of the gaf domain/hd domain protein2 from geobacter sulfurreducens Resolution 1.80 Å

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		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.						.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure																																		.	.	.	.	.																																						.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.																																						.	.	.	.	.	.
Query Sequence		S	E	S	L	R	K	V	C	E	I	I	R	D	D	I	H	A	D	A	V	A	I	T	N	T	D	H	V	L	A	Y	V	.	.	.	.	.	G	V	G	E	H	N	Y	Q	N	G	D	D	F	I	S	P	T	T	R	Q	A	M	N	Y	G	K	I	I	I	K	N	N	D	E	A	H	R	.	.	.	.	.	.
Query Conservation																																		.	.	.	.	.																																						.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.																																						.	.	.	.	.	.
Template Conservation
Template Sequence		I	K	D	L	S	R	L	L	R	K	L	V	K	T	R	W	I	A	V	Y	F	F	D	R	D	F	A	P	A	R	S	T	G	L	P	A	S	F	L	P	V	F	R	E	M	P	L	A	P	D	K	I	P	L	L	K	S	M	L	R	K	R	Q	H	L	M	L	T	D	P	G	S	S	D	L	L	T	P	K	L
Template Known Secondary structure													S			S																		S			G	G	G									B		T	T	T											T						S		G	G	G		T	T	S
Template Predicted Secondary structure
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
				294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.		.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure		.	.																									.
Query SS confidence		.	.																									.
Query Sequence		.	.	T	P	E	I	H	S	M	L	V	I	P	L	W	E	K	G	V	V	T	G	T	L	K	I	.	Y	Y	C	H	A	H	Q	I	T	S	S	L	Q	E	M	A	V	G	L	S	Q	I	I	S	T	Q	L	E	V	S	R	A	E	Q	L
Query Conservation		.	.																									.
Alig confidence		.	.																									.
Template Conservation
Template Sequence		R	K	L	L	R	N	L	C	V	L	A	V	P	M	V	V	R	T	Q	V	I	G	A	V	F	M	A	R	T	R	D	N	P	P	F	S	D	A	E	T	A	I	I	R	D	L	V	S	H	A	A	L	V	V	S	H	M	Q	L	F	D	E
Template Known Secondary structure					T	T	T											T	T												T	T	S																													T
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions