Job Description P0AA93 Confidence 100.00% Date Thu Jan 5 11:12:15 GMT 2012 Rank 5 Aligned Residues 186 % Identity 19% Template c3d36B_ PDB info PDB header:transferase/transferase inhibitor Chain: B: PDB Molecule:sporulation kinase b; PDBTitle: how to switch off a histidine kinase: crystal structure of2 geobacillus stearothermophilus kinb with the inhibitor sda Resolution 2.03 Å

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		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.																					.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	A	L	Q	S	K	I	N	P	H	F	L	F	N	A	L	N	A	I	S	S	S	I	R	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	P	D	T	A	R	Q	L	I	F	N	L	S	R	Y	L	R	Y	N	I	E	L	K	D	D	E	Q	I	D	I	K	K	E	L	Y
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template Conservation																																																																	.	.
Template Sequence		E	K	H	L	A	A	S	I	S	H	E	I	R	N	P	L	T	A	A	R	G	F	I	Q	L	I	E	E	Q	P	L	A	A	D	K	R	R	Q	Y	A	R	I	A	I	E	E	L	D	R	A	E	A	I	I	T	D	Y	L	T	F	A	K	P	.	.	A	P	E	T	P	E	K	L	N	V	K	L	E	I	E
Template Known Secondary structure																														S																														S	S			S	.	.	S
Template Predicted Secondary structure																																																																	.	.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.			.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	K	D	Y	I	A	I	E	Q	A	R	F	G	D	K	L	T	V	I	Y	D	I	D	E	E	V	N	C	C	I	P	S	L	L	I	Q	P	L	V	E	N	A	I	V	H	G	I	Q	P	C	K	G	K	G	V	V	T	I	S	V	A	E	C	G	N	R	V	R	I	A	V	R	D	T	G	H	G	I	D
Query Conservation
Alig confidence																								.	.	.
Template Conservation																								.	.	.
Template Sequence		R	V	I	D	I	L	R	P	L	A	N	M	S	C	V	D	I	Q	A	T	L	A	.	.	.	P	F	S	V	I	G	E	R	E	K	F	R	Q	C	L	L	N	V	M	K	N	A	I	E	A	M	P	N	G	G	T	L	Q	V	Y	V	S	I	D	N	G	R	V	L	I	R	I	A	D	T	G	V	G	M	T
Template Known Secondary structure														T	T									.	.	.																									T		T	T												T	T										S
Template Predicted Secondary structure																								.	.	.
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.				.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
		502	.	.	.	.	.	.	.	510	.	.	.						.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.
Predicted Secondary structure														.	.	.	.	.
Query SS confidence														.	.	.	.	.
Query Sequence		P	K	V	I	E	R	V	E	A	N	E	M	.	.	.	.	.	P	G	N	K	I	G	L	L	N	V	H	H	R	V	K	L	L	Y	G	E	G	L	H	I	R	R	L	E	P	G	T	E	I	A	F	Y	I	P	N
Query Conservation														.	.	.	.	.
Alig confidence														.	.	.	.	.
Template Conservation
Template Sequence		K	E	Q	L	E	R	L	G	E	P	Y	F	T	T	K	G	V	K	G	T	G	L	G	M	M	V	V	Y	R	I	I	E	S	M	N	G	T	I	R	I	E	S	E	I	H	K	G	T	T	V	S	I	Y	L	P	L
Template Known Secondary structure								T	T	S	T	T			S	S	G	G	G			S													T	T									T	T	T
Template Predicted Secondary structure
Template SS confidence
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions