Job Description P0AA93 Confidence 99.39% Date Thu Jan 5 11:12:15 GMT 2012 Rank 29 Aligned Residues 100 % Identity 17% Template c2q2eB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:type 2 dna topoisomerase 6 subunit b; PDBTitle: crystal structure of the topoisomerase vi holoenzyme from2 methanosarcina mazei Resolution 4.00 Å

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		454	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.				.	.	.	480	.	.	.	.	.	.		.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.										.	.	.	.	.	.	520
Predicted Secondary structure																									.	.	.											.																												.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.											.																												.	.	.	.	.	.	.	.	.
Query Sequence		S	L	L	I	Q	P	L	V	E	N	A	I	V	H	G	I	Q	P	C	K	G	K	G	.	.	.	V	V	T	I	S	V	A	E	C	G	.	N	R	V	R	I	A	V	R	D	T	G	H	G	I	D	P	K	V	I	E	R	V	E	A	N	E	M	.	.	.	.	.	.	.	.	.	P	G	N	K	I	G	L
Query Conservation																									.	.	.											.																												.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.											.																												.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	R	S	L	I	T	T	V	K	E	A	V	D	N	A	L	D	A	C	E	E	A	G	I	L	P	D	I	L	V	Q	V	E	R	T	G	P	D	Y	V	T	V	I	I	E	D	N	G	P	G	I	V	R	E	Q	I	P	K	V	F	A	K	L	L	Y	G	F	H	A	L	K	S	R	G	Q	Q	G	I	G	I
Template Known Secondary structure																					T	T	T	S		S											T	T	T										S					G	G	G						S													S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		521	.	.	.	.	.	.	.	.	530	.	.	.		.	.	.	.	.	.	540		.	.	.	.	.	.	.	.	.	550	.	.	.
Predicted Secondary structure															.								.
Query SS confidence															.								.
Query Sequence		L	N	V	H	H	R	V	K	L	L	Y	G	E	.	G	L	H	I	R	R	L	.	E	P	G	T	E	I	A	F	Y	I	P	N	Q
Query Conservation															.								.
Alig confidence															.								.
Template Conservation
Template Sequence		S	A	A	V	L	Y	A	Q	M	T	A	G	R	H	T	K	I	L	S	K	T	S	P	T	A	P	A	H	Y	Y	E	L	M	I	N
Template Known Secondary structure												T											S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions