Job Description P0AA93 Confidence 99.44% Date Thu Jan 5 11:12:15 GMT 2012 Rank 28 Aligned Residues 102 % Identity 13% Template c1mx0D_ PDB info PDB header:isomerase Chain: D: PDB Molecule:type ii dna topoisomerase vi subunit b; PDBTitle: structure of topoisomerase subunit Resolution 2.30 Å

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		450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.				.	.	.	480	.	.	.	.				.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.
Predicted Secondary structure																													.	.	.									.	.	.																														.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.									.	.	.																														.	.	.	.	.	.	.	.	.	.
Query Sequence		C	C	I	P	S	L	L	I	Q	P	L	V	E	N	A	I	V	H	G	I	Q	P	C	K	G	K	G	.	.	.	V	V	T	I	S	V	A	E	.	.	.	C	G	N	R	V	R	I	A	V	R	D	T	G	H	G	I	D	P	K	V	I	E	R	V	E	A	N	E	M	.	.	.	.	.	.	.	.	.	.
Query Conservation																													.	.	.									.	.	.																														.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.									.	.	.																														.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	P	N	P	A	R	A	L	Y	Q	T	V	R	E	L	I	E	N	S	L	D	A	T	D	V	H	G	I	L	P	N	I	K	I	T	I	D	L	I	D	D	A	R	Q	I	Y	K	V	N	V	V	D	N	G	I	G	I	P	P	Q	E	V	P	N	A	F	G	R	V	L	Y	S	S	K	Y	V	N	R	Q	T
Template Known Secondary structure			S	S																			T	T	G	G	G	T														T	T	T	T										S					G	G	G							S	S	S			S			S	S	S
Template Predicted Secondary structure
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
			514	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.		.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.
Predicted Secondary structure		.																					.
Query SS confidence		.																					.
Query Sequence		.	P	G	N	K	I	G	L	L	N	V	H	H	R	V	K	L	L	Y	G	E	.	G	L	H	I	R	R	L	E	P	G	T	E	I	A	F	Y	I	P
Query Conservation		.																					.
Alig confidence		.																					.
Template Conservation
Template Sequence		R	G	X	Y	G	L	G	V	K	A	A	V	L	Y	S	Q	X	H	Q	D	K	P	I	E	I	E	T	S	P	V	N	S	K	R	I	Y	T	F	K	L
Template Known Secondary structure		S			S	S																									T	T		S
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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