Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACT2
Confidence61.02%DateThu Jan 5 11:18:57 GMT 2012
Rank360Aligned Residues34
% Identity12%Templated1d5ya2
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like AraC type transcriptional activator
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30.........40.... .....50...
Predicted Secondary structure 








.



Query SS confidence 



























.








Query Sequence  IETAIAQFAQHGVSKTTLNDIADAANVT. RGAIYWHFE
Query Conservation 
 

  
    
    
   

  



.  


  
 
Alig confidence 









...














.








Template Conservation 
  
  

  ...   

  

   

     
 
 

Template Sequence  LSKSAVALRL. . . TARPILDIALQYRFDSQQTFTRAFK
Template Known Secondary structure  ...



TT
S
Template Predicted Secondary structure 
...







Template SS confidence 





































   5960........ .70.........80.........90...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions