Job Description P0ACT2 Confidence 99.85% Date Thu Jan 5 11:18:57 GMT 2012 Rank 49 Aligned Residues 185 % Identity 16% Template c3rh2A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:hypothetical tetr-like transcriptional regulator; PDBTitle: crystal structure of a hypothetical tetr-like transcriptional2 regulator (sama_0099) from shewanella amazonensis sb2b at 2.42 a3 resolution Resolution 2.42 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	Q	E	L	I	E	T	A	I	A	Q	F	A	Q	H	G	V	S	K	T	T	L	N	D	I	A	D	A	A	N	V	T	R	G	A	I	Y	W	H	F	E	N	K	T	Q	L	F	N	E	M	W	L	Q	Q	P	S	L	R	E	L	I	Q	E	H	L	T	A	G	L	E	H	D	P	F	Q	Q	L	R	E
Query Conservation
Alig confidence																																																																		.	.
Template Conservation																																																																		.	.
Template Sequence		T	R	D	K	I	I	Q	A	S	L	E	L	F	N	E	H	G	E	R	T	I	T	T	N	H	I	A	A	H	L	D	I	S	P	G	N	L	Y	Y	H	F	R	N	K	E	D	I	I	R	C	I	F	D	Q	Y	E	Q	H	L	L	L	G	F	K	.	.	P	Y	A	D	Q	K	V	D	L	E	L	L	X	S
Template Known Secondary structure																			G	G	G											T											S	S																				T		.	.			S	S				S
Template Predicted Secondary structure																																																																		.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.			.	.	.	70	.	.	.	.	.	.	.	.	.	80
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		K	L	I	V	G	L	Q	Y	I	A	K	I	P	R	Q	Q	A	L	L	K	I	L	Y	H	K	C	E	F	N	D	E	M	L	A	E	G	V	I	R	E	K	M	G	F	N	P	Q	T	L	R	E	V	L	Q	A	C	Q	Q	Q	G	C	V	A	N	N	.	L	D	L	D	V	V	M	I	I	I	D	G	A	F
Query Conservation																																																																			.
Alig confidence																									.	.	.	.	.																																						.
Template Conservation																									.	.	.	.	.
Template Sequence		Y	F	D	A	X	F	Y	T	X	W	Q	F	R	F	X	Y	A	N	L	A	D	I	L	.	.	.	.	.	A	R	D	D	T	L	K	A	R	Y	L	K	V	Q	Q	A	V	L	E	Q	S	I	A	V	L	N	Q	L	K	K	D	G	I	L	Q	I	E	D	E	R	I	A	D	L	A	D	T	I	K	X	I	I
Template Known Secondary structure													T						S						.	.	.	.	.		T																													T	T	S	B				G	G	G
Template Predicted Secondary structure																									.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.						.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		S	G	I	V	Q	N	W	L	M	N	M	A	G	Y	D	.	L	Y	K	Q	A	P	A	L	V	D	N	V	L	R	M	F	M	P
Query Conservation																	.
Alig confidence																	.
Template Conservation
Template Sequence		G	F	W	I	S	Y	K	L	T	Q	S	S	I	A	T	I	S	K	A	S	L	Y	E	G	L	L	R	V	L	X	I	F	K	A
Template Known Secondary structure												S	S																						T
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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