Job Description P0ACT2 Confidence 99.77% Date Thu Jan 5 11:18:57 GMT 2012 Rank 98 Aligned Residues 168 % Identity 14% Template c3o60A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:lin0861 protein; PDBTitle: the crystal structure of lin0861 from listeria innocua to 2.8a Resolution 2.80 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		A	E	A	L	K	T	R	Q	E	L	I	E	T	A	I	A	Q	F	A	Q	.	H	G	V	S	K	T	T	L	N	D	I	A	D	A	A	N	V	T	R	G	A	I	Y	W	H	F	E	N	K	T	Q	L	F	N	E	M	W	L	Q	Q	P	S	L	R	E	L	I	Q	E	H	L	T	A	G	L	E	H	D	P
Query Conservation																						.
Alig confidence																						.																																																				.	.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.	.
Template Sequence		L	R	T	Q	K	T	Q	T	K	L	Y	T	V	L	E	R	F	Y	V	E	D	R	T	F	E	S	I	S	I	K	D	L	C	E	Q	A	R	V	S	R	A	T	F	Y	R	H	H	K	E	I	I	Q	V	I	E	V	Q	I	L	R	T	X	Q	Y	F	S	L	E	F	D	Q	I	.	.	.	.	.	.	.	.
Template Known Secondary structure																					T	T			T	T	T											T											S	S	T																					T	S	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	Q	Q	L	R	E	K	L	I	V	G	L	Q	Y	I	A	K	I	P	R	Q	Q	A	L	L	K	I	L	Y	H	K	C	E	F	N	D	E	M	L	A	E	G	V	I	R	E	K	M	G	F	N	P	Q	T	L	R	E	V	L	Q	A	C	Q	Q	Q	G	C	V	A	N	N	L	D	L	D	V	V	M	I	I
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template Sequence		I	L	T	K	E	N	I	Q	R	L	I	L	R	T	I	Q	K	N	P	L	L	F	Q	V	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	W	S	R	A	E	N	I	F	I	D	V	V	S	G	E	I	L	R	I	S	L	L	K	E	V	S	F	S	.	D	S	K	F	X	P	N	C
Template Known Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T																				T	T				S	.	S	T	T
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.																		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	G	A	F	S	G	I	V	Q	N	W	L	M	N	M	A	G	Y	D	L	Y	K	Q	A	P	A	L	V	D	N	V	L	R	M	F
Query Conservation
Alig confidence																						.
Template Conservation																						.
Template Sequence		F	A	R	X	I	L	S	L	A	A	E	I	Q	Q	S	N	K	D	Y	T	.	N	D	Q	L	V	E	L	I	Q	E	A	A	R	F	L
Template Known Secondary structure																	S	S				.															T
Template Predicted Secondary structure																						.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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