Job Description P0ACT2 Confidence 99.85% Date Thu Jan 5 11:18:57 GMT 2012 Rank 46 Aligned Residues 198 % Identity 13% Template c3mvpA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:tetr/acrr transcriptional regulator; PDBTitle: the crystal structure of a tetr/acrr transcriptional regulator from2 streptococcus mutans to 1.85a Resolution 1.85 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	K	R	T	K	A	E	A	L	K	T	R	Q	E	L	I	E	T	A	I	A	Q	F	A	Q	H	G	V	S	K	T	T	L	N	D	I	A	D	A	A	N	V	T	R	G	A	I	Y	W	H	F	E	N	K	T	Q	L	F	N	E	M	W	L	Q	Q	P	S	L	R	E	L	I	Q	E	H	L	T	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	R	K	P	K	Q	E	R	S	I	E	K	R	N	K	I	L	Q	V	A	K	D	L	F	S	D	K	T	Y	F	N	V	T	T	N	E	I	A	K	K	A	D	V	S	V	G	T	L	Y	A	Y	F	A	S	K	E	D	I	L	T	A	L	L	K	R	Y	N	D	F	F	L	T	T	I	F	A	D	I	N	S
Template Known Secondary structure		S	S			S	S																							G	G	G											T	S										S	S																				T					S	S
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	H	D	P	F	Q	Q	L	R	E	K	L	I	V	G	L	Q	Y	I	A	K	I	P	R	Q	Q	A	L	L	K	I	L	Y	H	K	C	E	F	N	D	E	M	L	A	E	G	V	I	R	E	K	M	G	F	N	P	Q	T	L	R	E	V	L	Q	A	C	Q	Q	Q	G	C	V	A	N	N	L	D	L	D
Query Conservation
Alig confidence					.																																																																				.	.	.
Template Conservation					.																																																																				.	.	.
Template Sequence		Q	D	S	.	L	D	R	F	K	K	N	P	K	E	W	L	N	V	L	I	N	Q	L	L	A	A	E	D	K	I	F	H	A	Q	I	E	X	L	A	Y	A	I	P	Q	A	K	A	L	L	E	E	H	N	N	N	L	K	N	L	T	Y	K	C	L	L	Y	Y	S	D	Q	A	.	.	.	A	N	P	S	F	K
Template Known Secondary structure					.																							S												T	T	T																												T		S	.	.	.
Template Predicted Secondary structure					.																																																																				.	.	.
Template SS confidence
		96	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.				.	.	.	.	170	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.					.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																												.	.	.	.
Query SS confidence																												.	.	.	.
Query Sequence		V	V	M	I	I	I	D	G	A	F	S	G	I	V	Q	N	W	L	M	N	M	A	G	Y	D	L	.	.	.	.	Y	K	Q	A	P	A	L	V	D	N	V	L	R	M	F	M
Query Conservation																												.	.	.	.
Alig confidence																												.	.	.	.
Template Conservation
Template Sequence		T	L	S	L	V	V	F	D	F	I	S	A	L	V	D	E	L	L	Y	H	E	H	T	Q	E	E	A	H	Q	I	K	K	T	G	I	D	S	L	D	L	I	I	K	S	Y	L
Template Known Secondary structure																				S	S																								T	T
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions