Job Description P0ACT2 Confidence 99.71% Date Thu Jan 5 11:18:57 GMT 2012 Rank 114 Aligned Residues 160 % Identity 17% Template c3egqB_ PDB info PDB header:transcription Chain: B: PDB Molecule:tetr family transcriptional regulator; PDBTitle: crystal structure of a tetr-family transcriptional regulator (af_1817)2 from archaeoglobus fulgidus at 2.55 a resolution Resolution 2.55 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	R	Q	E	L	I	E	T	A	I	A	Q	F	A	Q	H	G	V	S	K	T	T	L	N	D	I	A	D	A	A	N	V	T	R	G	A	I	Y	W	H	F	E	N	K	T	Q	L	F	N	E	M	W	L	Q	Q	P	S	L	R	E	L	I	Q	E	H	L	T	A	G	L	E	H	D	P	F	Q	Q	L	R
Query Conservation
Alig confidence																																																																				.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.	.	.
Template Sequence		D	Q	S	V	R	I	I	E	A	A	L	R	L	Y	X	K	K	P	P	H	E	V	S	I	E	E	I	A	R	E	A	K	V	S	K	S	L	I	F	Y	H	F	E	S	K	Q	K	L	L	E	E	A	V	X	H	A	F	R	K	X	X	E	E	F	N	P	.	.	.	.	.	.	.	.	.	.	R	S	V	E
Template Known Secondary structure																		S		G	G	G											T	S										S	S																			T				.	.	.	.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.											.	70	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	L	I	V	G	L	Q	Y	I	A	K	I	P	R	Q	Q	A	L	L	K	I	L	Y	H	K	C	E	F	N	D	E	M	L	A	E	G	V	I	R	E	K	M	G	F	N	P	Q	T	L	R	E	V	L	Q	A	C	Q	Q	Q	G	C	V	A	N	N	L	D	L	D	V	V	M	I	I	I	D	G	A	F
Query Conservation
Alig confidence																															.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Template Sequence		E	V	V	D	Y	G	I	G	F	I	A	E	R	R	E	F	I	E	F	X	X	Y	A	L	S	Q	V	R	I	.	.	.	.	.	.	.	E	E	L	E	R	X	F	G	E	A	L	E	K	V	A	S	L	F	.	.	.	.	.	.	.	.	.	E	G	C	R	H	P	R	E	T	A	I	A	L	X	A	X	L
Template Known Secondary structure												T	S														T	S			.	.	.	.	.	.	.																		T	.	.	.	.	.	.	.	.	.	T	T	S	S	S
Template Predicted Secondary structure																															.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.								.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.										120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	I	V	Q	N	W	L	M	N	M	A	G	Y	D	L	Y	K	Q	A	P	A	L	V	D	N	V
Query Conservation
Alig confidence															.
Template Conservation															.
Template Sequence		D	G	L	S	I	Y	S	L	Y	F	D	L	G	.	K	L	E	K	Y	R	E	I	A	X	E	F	V
Template Known Secondary structure									T	T	S				.
Template Predicted Secondary structure															.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions