Job Description P0ACT2 Confidence 99.79% Date Thu Jan 5 11:18:57 GMT 2012 Rank 92 Aligned Residues 179 % Identity 18% Template c3cdlA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator aefr; PDBTitle: crystal structure of a tetr family transcriptional regulator from2 pseudomonas syringae pv. tomato str. dc3000 Resolution 2.36 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	K	T	R	Q	E	L	I	E	T	A	I	A	Q	F	A	Q	H	G	V	S	K	T	T	L	N	D	I	A	D	A	A	N	V	T	R	G	A	I	Y	W	H	F	E	N	K	T	Q	L	F	N	E	M	W	L	Q	Q	P	S	L	R	E	L	I	Q	E	H	L	T	A	G	L	E	H	D	P	F	Q	Q
Query Conservation
Alig confidence																																																																.	.	.	.	.
Template Conservation																																																																.	.	.	.	.
Template Sequence		T	D	Q	K	R	E	S	I	V	Q	A	A	I	A	E	F	G	D	R	G	F	E	I	T	S	X	D	R	I	A	A	R	A	E	V	S	K	R	T	V	Y	N	H	F	P	S	K	E	E	L	F	A	E	X	L	Q	R	L	W	N	C	A	.	.	.	.	.	E	V	V	Y	R	P	L	V	S	L	R	E	Q
Template Known Secondary structure																						T	T	T										T	T	S							T	T	S	S	S															T		.	.	.	.	.			S			T	T	S
Template Predicted Secondary structure																																																																.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.						.	.	.	.	70	.	.	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	E	K	L	I	V	G	L	Q	Y	I	A	K	I	P	R	Q	Q	A	L	L	K	I	L	Y	H	K	C	E	F	N	D	E	M	L	A	E	G	V	I	R	E	K	M	G	F	N	P	Q	T	L	R	E	V	L	Q	A	C	Q	Q	Q	G	C	V	A	N	N	L	D	L	D	V	V	M	I	I	I	D	G
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.	.																											.
Template Conservation																																			.	.	.	.	.	.	.	.	.																											.
Template Sequence		L	L	E	L	L	W	G	K	X	R	N	L	T	D	S	S	F	L	D	L	A	R	V	V	V	G	A	T	I	H	S	P	E	.	.	.	.	.	.	.	.	.	R	A	Q	V	W	L	E	E	T	F	S	A	W	I	R	A	A	Q	K	D	G	R	L	K	P	V	.	D	P	G	F	A	A	T	Q	X	H	A
Template Known Secondary structure														T																	S				.	.	.	.	.	.	.	.	.			T	T																T	T		B		S		.
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.																											.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.										.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.
		169	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		A	F	S	G	.	I	V	Q	N	W	L	M	N	M	A	G	Y	D	L	Y	K	Q	A	P	A	L	V	D	N	V	L	R	M	F	M
Query Conservation						.
Alig confidence						.
Template Conservation
Template Sequence		L	L	K	S	F	A	F	W	P	Q	V	T	F	N	A	A	L	L	T	P	Q	E	Q	S	N	V	V	E	S	A	L	N	X	F	L
Template Known Secondary structure								T
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions