Job Description P0ACT2 Confidence 99.82% Date Thu Jan 5 11:18:57 GMT 2012 Rank 73 Aligned Residues 188 % Identity 14% Template c2zcxA_ PDB info PDB header:transcription Chain: A: PDB Molecule:tetr-family transcriptional regulator; PDBTitle: crystal structure of tetr family transcriptional regulator2 sco7815 Resolution 2.22 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	A	L	K	T	R	Q	E	L	I	E	T	A	I	A	Q	F	A	Q	H	G	V	S	K	T	T	L	N	D	I	A	D	A	A	N	V	T	R	G	A	I	Y	W	H	F	E	N	K	T	Q	L	F	N	E	M	W	L	Q	Q	P	S	L	R	E	L	I	Q	E	H	L	T	A	G	L	E	H	D	P	F
Query Conservation
Alig confidence																																																																																	.
Template Conservation																																																																																	.
Template Sequence		Q	A	K	Q	Q	R	E	E	A	I	L	D	A	A	R	E	L	G	T	E	R	G	I	R	E	I	T	L	T	D	I	A	A	T	V	G	M	H	K	S	A	L	L	R	Y	F	E	T	R	E	Q	I	F	L	K	I	T	A	E	G	W	K	E	W	S	A	E	L	C	A	R	L	R	E	L	P	G	A	A	.
Template Known Secondary structure			T	T																				S	T	T											T	S										S	S																									T	T	S		T	T		.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	L	R	E	K	L	I	V	G	L	Q	Y	I	A	K	I	P	R	Q	Q	A	L	L	K	I	L	Y	H	K	C	E	F	N	D	E	M	L	A	E	G	V	I	R	E	K	M	G	F	N	P	Q	T	L	R	E	V	L	Q	A	C	Q	Q	Q	G	C	V	A	N	N	L	D	L	D	V	V	M	I	I	I
Query Conservation
Alig confidence		.	.																																																															.	.	.	.
Template Conservation		.	.																																																															.	.	.	.
Template Sequence		.	.	P	D	A	V	G	Q	V	F	A	A	T	L	A	A	R	P	L	F	C	D	L	L	A	Q	A	P	L	N	L	E	R	N	V	S	V	E	S	V	R	S	F	K	I	A	T	L	D	E	V	G	R	I	G	A	E	L	R	R	L	L	G	V	.	.	.	.	D	E	T	Q	A	V	D	V	I	A	T	A
Template Known Secondary structure		.	.														T															T	T	T	S	S																														.	.	.	.
Template Predicted Secondary structure		.	.																																																															.	.	.	.
Template SS confidence
				98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.					160	.	.	.	.	.	.	.	.	.	170	.
		167	.	.	170	.	.	.	.	.	.	.															.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	G	A	F	S	G	I	V	Q	N	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	M	N	M	A	G	Y	D	L	Y	K	Q	A	P	A	L	V	D	N	V	L	R	M	F
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	S	L	A	G	A	L	W	Q	M	A	T	P	G	P	H	I	Q	T	L	Y	R	S	D	P	R	L	A	H	A	V	V	E	V	E	P	R	L	N	R	V	L	G	A	L	L	R	G	I
Template Known Secondary structure														S												G	G	G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions