Job Description P0ACT2 Confidence 99.72% Date Thu Jan 5 11:18:57 GMT 2012 Rank 110 Aligned Residues 193 % Identity 10% Template c2y31A_ PDB info PDB header:transcription Chain: A: PDB Molecule:putative repressor simreg2; PDBTitle: simocyclinone c4 bound form of tetr-like repressor simr Resolution 2.30 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	T	K	A	E	A	L	K	T	R	Q	E	L	I	E	T	A	I	A	Q	F	A	Q	H	G	V	S	K	T	T	L	N	D	I	A	D	A	A	N	V	T	R	G	A	I	Y	W	H	F	E	N	K	T	Q	L	F	N	E	M	W	L	Q	Q	P	S	L	R	E	L	I	Q	E	H	L	T	A	G	L	E
Query Conservation
Alig confidence																																																																						.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.
Template Sequence		R	S	A	R	S	H	R	T	L	S	R	D	Q	I	V	R	A	A	V	K	V	A	D	T	E	G	V	E	A	A	S	M	R	R	V	A	A	E	L	G	A	G	T	M	S	L	Y	Y	Y	V	P	T	K	E	D	L	V	E	L	M	V	D	E	V	I	G	E	T	.	.	.	.	.	R	L	P	D	R	P	G
Template Known Secondary structure				T	T		S	S		B																		S	T	T											T							T	T	T			S														T	T		.	.	.	.	.				S	S
Template Predicted Secondary structure																																																																						.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.						.	.	.	90	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.																	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	D	P	F	Q	Q	L	R	E	K	L	I	V	G	L	Q	Y	I	A	K	I	P	R	Q	Q	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	K	I	L	Y	H	K	C	E	F	N	D	E	M	L	A	E	G	V	I	R	E	K	M	G	F	N	P	Q	T	L	R	E	V	L	Q	A
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	D	W	R	A	A	L	T	L	A	A	N	E	K	R	A	L	W	L	R	H	P	W	L	A	T	A	W	R	N	G	H	P	V	W	G	P	N	S	L	R	Q	Q	E	F	V	L	G	T	L	G	V	F	D	L	Q	V	D	E	L	L	S	L	I	G	L	Y	N	G	Y	V	E	S	F	V	R	N	E	V	G
Template Known Secondary structure		S																				S	G	G	G	G	T	S				S	S				S													T	T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.											.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.
Query Sequence		C	Q	Q	Q	G	C	V	A	N	N	L	D	L	D	V	V	M	I	I	I	D	G	A	F	S	G	I	V	.	.	.	.	.	.	.	.	.	.	Q	N	W	L	M	N	M	A	G	Y	D	L	Y	K	Q	A	P	A	L	V	D	N	V	L	R	M	F
Query Conservation																														.	.	.	.	.	.	.	.	.	.
Alig confidence									.																					.	.	.	.	.	.	.	.	.	.
Template Conservation									.
Template Sequence		W	L	E	E	A	R	R	.	T	K	V	D	M	R	E	W	M	R	R	S	G	P	Y	A	Q	Q	L	V	D	S	G	E	Y	P	M	F	A	R	V	L	A	E	T	V	A	P	H	M	G	P	D	Q	R	F	R	S	G	L	E	R	L	L	D	S	I
Template Known Secondary structure									.		S										T										T	S	S													G	G	G	S
Template Predicted Secondary structure									.
Template SS confidence
		174	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions