Job Description P0ACT2 Confidence 99.83% Date Thu Jan 5 11:18:57 GMT 2012 Rank 57 Aligned Residues 171 % Identity 20% Template c2rekA_ PDB info PDB header:transcription Chain: A: PDB Molecule:putative tetr-family transcriptional regulator; PDBTitle: crystal structure of tetr-family transcriptional regulator Resolution 1.86 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	L	K	T	R	Q	E	L	I	E	T	A	I	A	Q	F	A	Q	H	G	V	S	K	T	T	L	N	D	I	A	D	A	A	N	V	T	R	G	A	I	Y	W	H	F	E	N	K	T	Q	L	F	N	E	M	W	L	Q	Q	P	S	L	R	E	L	I	Q	E	H	L	T	A	G	L	E	H	D	P	F	Q
Query Conservation
Alig confidence																								.																																																			.	.
Template Conservation																								.																																																			.	.
Template Sequence		D	A	R	R	N	Y	D	R	I	I	E	A	A	A	A	E	V	A	R	H	G	A	.	D	A	S	L	E	E	I	A	R	R	A	G	V	G	S	A	T	L	H	R	H	F	P	S	R	W	G	L	L	Q	A	V	F	Q	E	R	V	A	Q	L	C	D	E	A	R	S	L	A	A	E	.	.	H	P	P	A	T
Template Known Secondary structure																						G	G	.	G											T											S	S																											.	.	S
Template Predicted Secondary structure																								.																																																			.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.			.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	R	E	K	L	I	V	G	L	Q	Y	I	A	K	I	P	R	Q	Q	A	L	L	K	I	L	Y	H	K	C	E	F	N	D	E	M	L	A	E	G	V	I	R	E	K	M	G	F	N	P	Q	T	L	R	E	V	L	Q	A	C	Q	Q	Q	G	C	V	A	N	N	L	D	L	D	V	V	M	I	I	I	D
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	T	R	W	L	T	S	L	A	V	F	G	A	V	T	R	G	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	S	L	A	A	L	D	S	R	C	E	Q	L	L	T	E	A	G	A	D	L	L	A	R	A	Q	E	D	G	T	V	R	D	D	V	T	A	L	E	L	L	S	L	A	N
Template Known Secondary structure																					G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G																										T	T	S	S		T	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.																110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	F	S	G	I	V	Q	N	W	L	M	N	M	A	G	Y	D	L	Y	K	Q	A	P	A	L	V	D	N	V	L	R	M	F	M	P
Query Conservation
Alig confidence				.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.
Template Sequence		A	V	.	.	.	.	.	.	.	S	L	A	A	E	H	T	P	D	A	A	H	H	A	T	R	L	M	G	I	A	L	G	G	L	G	A
Template Known Secondary structure				.	.	.	.	.	.	.					T	T	S	T	T																S
Template Predicted Secondary structure				.	.	.	.	.	.	.
Template SS confidence
		164	.								.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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