Job Description P0ACT2 Confidence 99.88% Date Thu Jan 5 11:18:57 GMT 2012 Rank 30 Aligned Residues 200 % Identity 14% Template c2rasB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: crystal structure of a putative tetr/acrr family transcriptional2 regulator (saro_0558) from novosphingobium aromaticivorans dsm at3 1.80 a resolution Resolution 1.80 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	A	L	K	T	R	Q	E	L	I	E	T	A	I	A	Q	F	A	Q	H	G	V	S	K	T	T	L	N	D	I	A	D	A	A	N	V	T	R	G	A	I	Y	W	H	F	E	N	K	T	Q	L	F	N	E	M	W	L	Q	Q	P	S	L	R	E	L	I	Q	E	H	L	T	A	G	L	E	H	D	P	F
Query Conservation
Alig confidence																																																																										.
Template Conservation																																																																										.
Template Sequence		T	E	H	D	A	X	R	A	R	L	V	D	V	A	Q	A	I	V	E	E	R	G	G	A	G	L	T	L	S	E	L	A	A	R	A	G	I	S	Q	A	N	L	S	R	Y	F	E	T	R	E	D	L	X	E	A	I	A	D	Y	W	F	H	P	X	V	E	I	X	E	D	V	L	.	A	S	D	L	P	P	R
Template Known Secondary structure																								G	G	G											T	S							T	T		S	S												T	T												.		S
Template Predicted Secondary structure																																																																										.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	L	R	E	K	L	I	V	G	L	Q	Y	I	A	K	I	P	R	Q	Q	A	L	L	K	I	L	Y	H	K	C	E	F	N	D	E	M	L	A	E	G	V	I	R	E	K	M	G	F	N	P	Q	T	L	R	E	V	L	Q	A	C	Q	Q	Q	G	C	V	A	N	N	L	D	L	D	V	V	M	I	I	I
Query Conservation
Alig confidence																																	.	.	.	.																																		.
Template Conservation																																	.	.	.	.																																		.
Template Sequence		R	K	X	Y	E	F	F	A	R	R	F	V	V	X	R	R	K	W	E	A	D	P	V	K	L	Q	T	Y	I	E	V	.	.	.	.	G	N	D	Y	F	E	Q	V	R	S	Y	I	D	L	A	D	H	Y	L	G	E	I	I	G	E	A	X	S	D	G	A	F	S	.	G	L	E	V	D	E	T	I	S	L	V
Template Known Secondary structure																																	.	.	.	.																														T		S	T	.	T
Template Predicted Secondary structure																																	.	.	.	.																																		.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.					.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		D	G	A	F	S	G	I	V	Q	N	W	L	M	N	M	.	A	G	Y	D	L	Y	K	Q	A	P	A	L	V	D	N	V	L	R	M	F	M	P	D	E	N	I	T	K	L	I	H
Query Conservation																	.
Alig confidence																	.
Template Conservation
Template Sequence		N	Q	X	C	A	P	Y	C	A	L	N	T	X	T	T	F	X	E	R	L	S	E	D	K	L	A	R	I	V	D	A	V	F	D	G	L	S	A	Q	D	R	G	A	R	S	L	T
Template Known Secondary structure					S	G	G	G	T									G	G	G																		S	S	S			S	S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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